Query: NC_013929:6923884 Streptomyces scabiei 87.22 chromosome, complete genome
Start: 6923884, End: 6941599, Length: 17716
Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_021177:2241647* | 2241647 | 2266498 | 24852 | Streptomyces fulvissimus DSM 40593, complete genome | 0 | 1277 | BLASTN svg | BLASTP svg |
| NC_015957:8677395* | 8677395 | 8707779 | 30385 | Streptomyces violaceusniger Tu 4113 chromosome, complete genome | 3e-67 | 264 | BLASTN svg | BLASTP svg |
| NC_007777:4016000* | 4016000 | 4038599 | 22600 | Frankia sp. CcI3, complete genome | 7e-28 | 133 | BLASTN svg | BLASTP svg |
| NC_009921:1736000* | 1736000 | 1754365 | 18366 | Frankia sp. EAN1pec, complete genome | 3e-24 | 121 | BLASTN svg | BLASTP svg |
| NC_013510:3640776* | 3640776 | 3658960 | 18185 | Thermomonospora curvata DSM 43183, complete genome | 4e-23 | 117 | BLASTN svg | BLASTP svg |
| NC_008541:4066294 | 4066294 | 4094938 | 28645 | Arthrobacter sp. FB24 chromosome 1, complete sequence | 2e-19 | 105 | BLASTN svg | BLASTP svg |
| NC_014666:1601972* | 1601972 | 1626519 | 24548 | Frankia sp. EuI1c chromosome, complete genome | 1e-17 | 99.6 | BLASTN svg | BLASTP svg |
| NC_013131:7889127* | 7889127 | 7915269 | 26143 | Catenulispora acidiphila DSM 44928, complete genome | 6e-16 | 93.7 | BLASTN svg | BLASTP svg |
| NC_008578:889907* | 889907 | 922194 | 32288 | Acidothermus cellulolyticus 11B, complete genome | 9e-15 | 89.7 | BLASTN svg | BLASTP svg |
| NC_020133:3787844* | 3787844 | 3816465 | 28622 | Mycobacterium liflandii 128FXT, complete genome | 9e-15 | 89.7 | BLASTN svg | BLASTP svg |
| NC_013159:1422370* | 1422370 | 1441599 | 19230 | Saccharomonospora viridis DSM 43017, complete genome | 4e-14 | 87.7 | BLASTN svg | BLASTP svg |
| NC_013235:2129982* | 2129982 | 2172185 | 42204 | Nakamurella multipartita DSM 44233, complete genome | 6e-13 | 83.8 | BLASTN svg | BLASTP svg |
| NC_013093:1411882* | 1411882 | 1438302 | 26421 | Actinosynnema mirum DSM 43827, complete genome | 6e-13 | 83.8 | BLASTN svg | BLASTP svg |
| NC_007798:213069* | 213069 | 236541 | 23473 | Neorickettsia sennetsu str. Miyayama, complete genome | 9e-12 | 79.8 | BLASTN svg | BLASTP svg |
| NC_006361:1720031 | 1720031 | 1745299 | 25269 | Nocardia farcinica IFM 10152, complete genome | 9e-12 | 79.8 | BLASTN svg | BLASTP svg |
| NC_010397:1802724 | 1802724 | 1843734 | 41011 | Mycobacterium abscessus chromosome Chromosome, complete sequence | 3e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_015656:2484749* | 2484749 | 2515484 | 30736 | Frankia symbiont of Datisca glomerata chromosome, complete genome | 1e-10 | 75.8 | BLASTN svg | BLASTP svg |
| NC_007777:3962000 | 3962000 | 3979941 | 17942 | Frankia sp. CcI3, complete genome | 2e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_008278:5855401* | 5855401 | 5894991 | 39591 | Frankia alni ACN14a, complete genome | 2e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_019673:526000* | 526000 | 562128 | 36129 | Saccharothrix espanaensis DSM 44229 complete genome | 9e-09 | 69.9 | BLASTN svg | BLASTP svg |
| NC_013757:1732747* | 1732747 | 1750641 | 17895 | Geodermatophilus obscurus DSM 43160, complete genome | 9e-09 | 69.9 | BLASTN svg | BLASTP svg |
| NC_010505:5967324* | 5967324 | 5992134 | 24811 | Methylobacterium radiotolerans JCM 2831, complete genome | 9e-09 | 69.9 | BLASTN svg | BLASTP svg |
| NC_009921:8147947* | 8147947 | 8187424 | 39478 | Frankia sp. EAN1pec, complete genome | 9e-09 | 69.9 | BLASTN svg | BLASTP svg |
| NC_007777:2841000 | 2841000 | 2903932 | 62933 | Frankia sp. CcI3, complete genome | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_007880:508407 | 508407 | 530944 | 22538 | Francisella tularensis subsp. holarctica, complete genome | 5e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_008369:514995 | 514995 | 534666 | 19672 | Francisella tularensis subsp. holarctica OSU18, complete genome | 5e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_014666:8459724 | 8459724 | 8483629 | 23906 | Frankia sp. EuI1c chromosome, complete genome | 5e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_019897:2908971* | 2908971 | 2941176 | 32206 | Thermobacillus composti KWC4 chromosome, complete genome | 5e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_015856:3059737 | 3059737 | 3083049 | 23313 | Collimonas fungivorans Ter331 chromosome, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_014168:2820315 | 2820315 | 2846812 | 26498 | Segniliparus rotundus DSM 44985 chromosome, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_008544:55451 | 55451 | 78645 | 23195 | Burkholderia cenocepacia HI2424 chromosome 3, complete sequence | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_008062:81338 | 81338 | 100148 | 18811 | Burkholderia cenocepacia AU 1054 chromosome 3, complete sequence | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_014623:6509000 | 6509000 | 6535342 | 26343 | Stigmatella aurantiaca DW4/3-1 chromosome, complete genome | 8e-06 | 60 | BLASTN svg | BLASTP svg |
| NC_014210:4053094 | 4053094 | 4075599 | 22506 | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome, | 8e-06 | 60 | BLASTN svg | BLASTP svg |