Query: NC_013929:3953046 Streptomyces scabiei 87.22 chromosome, complete genome
Start: 3953046, End: 3977028, Length: 23983
Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_003888:7561923* | 7561923 | 7647787 | 85865 | Streptomyces coelicolor A3(2), complete genome | 0 | 1544 | BLASTN svg | BLASTP svg |
NC_011891:315182* | 315182 | 338099 | 22918 | Anaeromyxobacter dehalogenans 2CP-1, complete genome | 2e-38 | 168 | BLASTN svg | BLASTP svg |
NC_011145:306623* | 306623 | 330373 | 23751 | Anaeromyxobacter sp. K, complete genome | 2e-38 | 168 | BLASTN svg | BLASTP svg |
NC_014034:995661* | 995661 | 1022737 | 27077 | Rhodobacter capsulatus SB1003 chromosome, complete genome | 1e-20 | 109 | BLASTN svg | BLASTP svg |
NC_014318:1320170 | 1320170 | 1341462 | 21293 | Amycolatopsis mediterranei U32 chromosome, complete genome | 2e-16 | 95.6 | BLASTN svg | BLASTP svg |
NC_014221:554764 | 554764 | 578245 | 23482 | Truepera radiovictrix DSM 17093 chromosome, complete genome | 3e-15 | 91.7 | BLASTN svg | BLASTP svg |
NC_008148:2498000 | 2498000 | 2550851 | 52852 | Rubrobacter xylanophilus DSM 9941, complete genome | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_009921:3255833 | 3255833 | 3274964 | 19132 | Frankia sp. EAN1pec, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_009921:3473854* | 3473854 | 3529599 | 55746 | Frankia sp. EAN1pec, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_009921:8648994 | 8648994 | 8673110 | 24117 | Frankia sp. EAN1pec, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_007760:2094746 | 2094746 | 2122862 | 28117 | Anaeromyxobacter dehalogenans 2CP-C, complete genome | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_015656:105840* | 105840 | 123838 | 17999 | Frankia symbiont of Datisca glomerata chromosome, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_015656:132633* | 132633 | 169914 | 37282 | Frankia symbiont of Datisca glomerata chromosome, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_015656:1469501 | 1469501 | 1488048 | 18548 | Frankia symbiont of Datisca glomerata chromosome, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_015656:1618329 | 1618329 | 1638099 | 19771 | Frankia symbiont of Datisca glomerata chromosome, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_015656:1653450 | 1653450 | 1680622 | 27173 | Frankia symbiont of Datisca glomerata chromosome, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_015656:2484749* | 2484749 | 2515484 | 30736 | Frankia symbiont of Datisca glomerata chromosome, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_015656:4850833 | 4850833 | 4871241 | 20409 | Frankia symbiont of Datisca glomerata chromosome, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_015656:632960* | 632960 | 663110 | 30151 | Frankia symbiont of Datisca glomerata chromosome, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_013446:2655955 | 2655955 | 2681958 | 26004 | Comamonas testosteroni CNB-2, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_015957:7301546 | 7301546 | 7327102 | 25557 | Streptomyces violaceusniger Tu 4113 chromosome, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_010162:10962500 | 10962500 | 10980099 | 17600 | Sorangium cellulosum 'So ce 56', complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_018750:6869675 | 6869675 | 6893689 | 24015 | Streptomyces venezuelae ATCC 10712, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_013093:2230171* | 2230171 | 2254980 | 24810 | Actinosynnema mirum DSM 43827, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_010338:588000 | 588000 | 611247 | 23248 | Caulobacter sp. K31, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_003155:320979 | 320979 | 339185 | 18207 | Streptomyces avermitilis MA-4680, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |