Pre_GI: BLASTN Hits

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Query: NC_013929:3953046 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 3953046, End: 3977028, Length: 23983

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_003888:7561923*7561923764778785865Streptomyces coelicolor A3(2), complete genome01544BLASTN svgBLASTP svg
NC_011891:315182*31518233809922918Anaeromyxobacter dehalogenans 2CP-1, complete genome2e-38168BLASTN svgBLASTP svg
NC_011145:306623*30662333037323751Anaeromyxobacter sp. K, complete genome2e-38168BLASTN svgBLASTP svg
NC_014034:995661*995661102273727077Rhodobacter capsulatus SB1003 chromosome, complete genome1e-20109BLASTN svgBLASTP svg
NC_014318:13201701320170134146221293Amycolatopsis mediterranei U32 chromosome, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_014221:55476455476457824523482Truepera radiovictrix DSM 17093 chromosome, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_008148:24980002498000255085152852Rubrobacter xylanophilus DSM 9941, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_009921:32558333255833327496419132Frankia sp. EAN1pec, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_009921:3473854*3473854352959955746Frankia sp. EAN1pec, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_009921:86489948648994867311024117Frankia sp. EAN1pec, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_007760:20947462094746212286228117Anaeromyxobacter dehalogenans 2CP-C, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_015656:105840*10584012383817999Frankia symbiont of Datisca glomerata chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015656:132633*13263316991437282Frankia symbiont of Datisca glomerata chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015656:14695011469501148804818548Frankia symbiont of Datisca glomerata chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015656:16183291618329163809919771Frankia symbiont of Datisca glomerata chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015656:16534501653450168062227173Frankia symbiont of Datisca glomerata chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015656:2484749*2484749251548430736Frankia symbiont of Datisca glomerata chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015656:48508334850833487124120409Frankia symbiont of Datisca glomerata chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015656:632960*63296066311030151Frankia symbiont of Datisca glomerata chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_013446:26559552655955268195826004Comamonas testosteroni CNB-2, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015957:73015467301546732710225557Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010162:10962500109625001098009917600Sorangium cellulosum 'So ce 56', complete genome7e-0763.9BLASTN svgBLASTP svg
NC_018750:68696756869675689368924015Streptomyces venezuelae ATCC 10712, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013093:2230171*2230171225498024810Actinosynnema mirum DSM 43827, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010338:58800058800061124723248Caulobacter sp. K31, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_003155:32097932097933918518207Streptomyces avermitilis MA-4680, complete genome3e-0661.9BLASTN svgBLASTP svg