Pre_GI: BLASTN Hits

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Query: NC_013929:1537980 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 1537980, End: 1561334, Length: 23355

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009142:40463764046376406758021205Saccharopolyspora erythraea NRRL 2338, complete genome7e-47196BLASTN svgBLASTP svg
NC_007650:841408414010870224563Burkholderia thailandensis E264 chromosome II, complete sequence3e-1591.7BLASTN svgBLASTP svg
NC_009078:749547495410871533762Burkholderia pseudomallei 1106a chromosome II, complete sequence3e-0971.9BLASTN svgBLASTP svg
NC_009075:922109221012709934890Burkholderia pseudomallei 668 chromosome II, complete sequence3e-0971.9BLASTN svgBLASTP svg
NC_007435:19143751914375195826743893Burkholderia pseudomallei 1710b chromosome II, complete sequence3e-0971.9BLASTN svgBLASTP svg
NC_006351:730007300010112828129Burkholderia pseudomallei K96243 chromosome 2, complete sequence3e-0971.9BLASTN svgBLASTP svg
NC_012721:25561602556160260386447705Burkholderia glumae BGR1 chromosome 2, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_021177:21398382139838216484225005Streptomyces fulvissimus DSM 40593, complete genome2e-0765.9BLASTN svgBLASTP svg