Pre_GI: BLASTN Hits

Some Help

Query: NC_013768:29324 Listeria monocytogenes 08-5923, complete genome

Start: 29324, End: 47416, Length: 18093

Host Lineage: Listeria monocytogenes; Listeria; Listeriaceae; Bacillales; Firmicutes; Bacteria

General Information: This organism, which causes listeriosis, is one of the leading causes of death from food-borne pathogens especially in pregnant women, newborns, the elderly, and immunocompromised individuals. It is found in environments such as decaying vegetable matter, sewage, water, and soil, and it can survive extremes of both temperatures (1-45 degrees C) and salt concentration marking it as an extremely dangerous food-born pathogen, especially on food that is not reheated. This organism is enteroinvasive, and utilizes an actin-based motility system by using a surface protein, ActA, that promotes actin polymerization, to spread intercellularly using the polymerized cytoskeletal protein as a "motor".




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_003210:2879906*2879906290440224497Listeria monocytogenes EGD-e, complete genome013150BLASTN svgBLASTP svg
NC_016011:28757472875747290001324267Listeria ivanovii subsp. ivanovii PAM 55, complete genome02585BLASTN svgBLASTP svg
NC_016011:14193941419394144212522732Listeria ivanovii subsp. ivanovii PAM 55, complete genome2e-0661.9BLASTN svgBLASTP svg