Pre_GI: BLASTN Hits

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Query: NC_013198:36829 Lactobacillus rhamnosus GG, complete genome

Start: 36829, End: 57529, Length: 20701

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_014334:37040370405959922560Lactobacillus casei str. Zhang chromosome, complete genome0837BLASTN svgBLASTP svg
NC_008526:250000*25000027159921600Lactobacillus casei ATCC 334, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014334:99000*9900012029021291Lactobacillus casei str. Zhang chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_008526:74500*7450011650442005Lactobacillus casei ATCC 334, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_014334:58952658952661259823073Lactobacillus casei str. Zhang chromosome, complete genome1e-0560BLASTN svgBLASTP svg
NC_014334:1848340*1848340187219923860Lactobacillus casei str. Zhang chromosome, complete genome1e-0560BLASTN svgBLASTP svg
NC_013199:11500001150000117399223993Lactobacillus rhamnosus Lc 705, complete genome1e-0560BLASTN svgBLASTP svg