Pre_GI: BLASTN Hits

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Query: NC_012811:62867 Methylobacterium extorquens AM1 megaplasmid, complete sequence

Start: 62867, End: 86239, Length: 23373

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_012808:38977513897751392263924889Methylobacterium extorquens AM1, complete genome02956BLASTN svgBLASTP svg
NC_011894:65168566516856654688430029Methylobacterium nodulans ORS 2060, complete genome01225BLASTN svgBLASTP svg
NC_012811:11388971138897115709918203Methylobacterium extorquens AM1 megaplasmid, complete sequence01094BLASTN svgBLASTP svg
NC_007406:85762585762588729129667Nitrobacter winogradskyi Nb-255, complete genome5e-54220BLASTN svgBLASTP svg
NC_007406:33540003354000337855624557Nitrobacter winogradskyi Nb-255, complete genome5e-54220BLASTN svgBLASTP svg
NC_007406:26159162615916263852322608Nitrobacter winogradskyi Nb-255, complete genome6e-35157BLASTN svgBLASTP svg
NC_002696:2941644*2941644296461322970Caulobacter crescentus CB15, complete genome1e-33153BLASTN svgBLASTP svg
NC_015684:31579413157941318409926159Oligotropha carboxidovorans OM5 chromosome, complete genome9e-25123BLASTN svgBLASTP svg
NC_011386:93114093114096230731168Oligotropha carboxidovorans OM5, complete genome9e-25123BLASTN svgBLASTP svg
NC_015580:1302000*1302000132821126212Novosphingobium sp. PP1Y, complete genome3e-24121BLASTN svgBLASTP svg
NC_010725:39619813961981398401922039Methylobacterium populi BJ001, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_015376:20100092010009204069430686Burkholderia gladioli BSR3 chromosome chromosome 2, complete2e-1075.8BLASTN svgBLASTP svg