Pre_GI: BLASTN Hits

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Query: NC_012808:4098465 Methylobacterium extorquens AM1, complete genome

Start: 4098465, End: 4123599, Length: 25135

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_011757:39881*398817409934219Methylobacterium chloromethanicum CM4, complete genome2e-69272BLASTN svgBLASTP svg
NC_012811:22754122754127111643576Methylobacterium extorquens AM1 megaplasmid, complete sequence2e-28135BLASTN svgBLASTP svg
NC_010725:4219500*4219500425012730628Methylobacterium populi BJ001, complete genome4e-24121BLASTN svgBLASTP svg
NC_007964:30367713036771306048323713Nitrobacter hamburgensis X14, complete genome2e-19105BLASTN svgBLASTP svg
NC_016027:2047954*2047954211021762264Gluconacetobacter xylinus NBRC 3288, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_012808:19790001979000199740518406Methylobacterium extorquens AM1, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_014006:2999500*2999500304199842499Sphingobium japonicum UT26S chromosome 1, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_016027:13576591357659140149643838Gluconacetobacter xylinus NBRC 3288, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_016027:1401500*1401500141909917600Gluconacetobacter xylinus NBRC 3288, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_016027:19028541902854193735834505Gluconacetobacter xylinus NBRC 3288, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_016027:22918022918026174732568Gluconacetobacter xylinus NBRC 3288, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_016027:25804772580477259977719301Gluconacetobacter xylinus NBRC 3288, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_016027:3038943*3038943307052031578Gluconacetobacter xylinus NBRC 3288, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_016027:54305*543058531631012Gluconacetobacter xylinus NBRC 3288, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_010125:15383351538335158603047696Gluconacetobacter diazotrophicus PAl 5, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_010125:1*12375623756Gluconacetobacter diazotrophicus PAl 5, complete genome2e-0765.9BLASTN svgBLASTP svg