Query: NC_012466:1367099 Streptococcus pneumoniae JJA, complete genome
Start: 1367099, End: 1389599, Length: 22501
Host Lineage: Streptococcus pneumoniae; Streptococcus; Streptococcaceae; Lactobacillales; Firmicutes; Bacteria
General Information: This organism is a member of the normal human nasopharyngeal flora. There are more than 85 different antigenic types of S. pneumoniae, which are classified based on their capsule antigens. This organism is also the most common cause of sinusitis, acute bacterial otitis media, and conjunctivitis beyond early childhood. S. pneumoniae is also known to cause pneumonia, meningitis, and bacteremia. Streptococci are Gram-positive, non-motile, non-spore forming, catalase-negative cocci that occur in pairs or chains. Members of this genus vary widely in pathogenic potential. Most streptococci are facultative anaerobes, and some are obligate anaerobes.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_003098:1372875* | 1372875 | 1397930 | 25056 | Streptococcus pneumoniae R6, complete genome | 0 | 17950 | BLASTN svg | BLASTP svg |
NC_008533:1380406* | 1380406 | 1405461 | 25056 | Streptococcus pneumoniae D39, complete genome | 0 | 17940 | BLASTN svg | BLASTP svg |
NC_012469:1403412* | 1403412 | 1424843 | 21432 | Streptococcus pneumoniae Taiwan19F-14, complete genome | 0 | 11950 | BLASTN svg | BLASTP svg |
NC_003098:1925783 | 1925783 | 1948099 | 22317 | Streptococcus pneumoniae R6, complete genome | 2e-31 | 145 | BLASTN svg | BLASTP svg |
NC_008533:1935500 | 1935500 | 1954119 | 18620 | Streptococcus pneumoniae D39, complete genome | 2e-31 | 145 | BLASTN svg | BLASTP svg |
NC_010582:2091138* | 2091138 | 2115370 | 24233 | Streptococcus pneumoniae CGSP14, complete genome | 2e-31 | 145 | BLASTN svg | BLASTP svg |
NC_012466:2008000 | 2008000 | 2030117 | 22118 | Streptococcus pneumoniae JJA, complete genome | 2e-31 | 145 | BLASTN svg | BLASTP svg |
NC_012467:1997484* | 1997484 | 2020193 | 22710 | Streptococcus pneumoniae P1031, complete genome | 2e-31 | 145 | BLASTN svg | BLASTP svg |
NC_015875:1926981* | 1926981 | 1949413 | 22433 | Streptococcus pseudopneumoniae IS7493 chromosome, complete genome | 3e-27 | 131 | BLASTN svg | BLASTP svg |
NC_015875:190041* | 190041 | 211161 | 21121 | Streptococcus pseudopneumoniae IS7493 chromosome, complete genome | 1e-23 | 119 | BLASTN svg | BLASTP svg |
NC_015875:646000* | 646000 | 669244 | 23245 | Streptococcus pseudopneumoniae IS7493 chromosome, complete genome | 5e-20 | 107 | BLASTN svg | BLASTP svg |
NC_010582:1771591 | 1771591 | 1796126 | 24536 | Streptococcus pneumoniae CGSP14, complete genome | 3e-18 | 101 | BLASTN svg | BLASTP svg |
NC_004606:623853 | 623853 | 655600 | 31748 | Streptococcus pyogenes SSI-1, complete genome | 2e-16 | 95.6 | BLASTN svg | BLASTP svg |
NC_007296:1230614 | 1230614 | 1261498 | 30885 | Streptococcus pyogenes MGAS6180, complete genome | 2e-16 | 95.6 | BLASTN svg | BLASTP svg |
NC_015875:1505034* | 1505034 | 1529978 | 24945 | Streptococcus pseudopneumoniae IS7493 chromosome, complete genome | 7e-16 | 93.7 | BLASTN svg | BLASTP svg |
NC_008533:592000* | 592000 | 614367 | 22368 | Streptococcus pneumoniae D39, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_007297:1001981 | 1001981 | 1025171 | 23191 | Streptococcus pyogenes MGAS5005, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_012466:590883* | 590883 | 610682 | 19800 | Streptococcus pneumoniae JJA, complete genome | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_013893:511222 | 511222 | 534209 | 22988 | Staphylococcus lugdunensis HKU09-01 chromosome, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_003098:586941* | 586941 | 605116 | 18176 | Streptococcus pneumoniae R6, complete genome | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_010380:124655 | 124655 | 150982 | 26328 | Streptococcus pneumoniae Hungary19A-6, complete genome | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_020995:2255521* | 2255521 | 2275228 | 19708 | Enterococcus casseliflavus EC20, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_003210:870587 | 870587 | 889502 | 18916 | Listeria monocytogenes EGD-e, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_004116:560893 | 560893 | 582712 | 21820 | Streptococcus agalactiae 2603V/R, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_008528:1265542* | 1265542 | 1293221 | 27680 | Oenococcus oeni PSU-1, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_012004:1053682 | 1053682 | 1084221 | 30540 | Streptococcus uberis 0140J, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |