Pre_GI: BLASTN Hits

Some Help

Query: NC_012225:569590 Brachyspira hyodysenteriae WA1, complete genome

Start: 569590, End: 593146, Length: 23557

Host Lineage: Brachyspira hyodysenteriae; Brachyspira; Brachyspiraceae; Spirochaetales; Spirochaetes; Bacteria

General Information: Brachyspira hyodysenteriae is the causative agent of swine dysentery, which is a severe mucohemorrhagic diarrheal disease of pigs that has economic significance for pork-producing countries. The bacterium can survive for several weeks in cold moist conditions but not under warm dry conditions. It spreads slowly, building up in numbers as the dose rate of the causal agent builds up in the environment. Pigs that recover develop a low immunity and rarely suffer from the disease again. It can be spread by other organisms (flies, mice, birds and dogs) or external mechanical factors; its main habitat is the porcine cecum and colon. It is chemotactically attracted to mucin which it penetrates with a corkscrew-like motility.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_019908:121178*12117816296041783Brachyspira pilosicoli P43/6/78 chromosome, complete genome0833BLASTN svgBLASTP svg
NC_018607:921923*92192396497843056Brachyspira pilosicoli B2904 chromosome, complete genome0833BLASTN svgBLASTP svg
NC_014330:50541250541254359938188Brachyspira pilosicoli 95/1000 chromosome, complete genome0825BLASTN svgBLASTP svg
NC_018604:19435611943561196628922729Brachyspira pilosicoli WesB complete genome0809BLASTN svgBLASTP svg
NC_019908:49992949992952450224574Brachyspira pilosicoli P43/6/78 chromosome, complete genome0652BLASTN svgBLASTP svg
NC_018607:14639181463918148609922182Brachyspira pilosicoli B2904 chromosome, complete genome6e-177628BLASTN svgBLASTP svg
NC_018604:1489567*1489567151411524549Brachyspira pilosicoli WesB complete genome2e-136494BLASTN svgBLASTP svg
NC_018607:1251357*1251357127532423968Brachyspira pilosicoli B2904 chromosome, complete genome4e-135490BLASTN svgBLASTP svg
NC_014330:2520906*2520906254409923194Brachyspira pilosicoli 95/1000 chromosome, complete genome4e-135490BLASTN svgBLASTP svg
NC_019908:700000*70000072314623147Brachyspira pilosicoli P43/6/78 chromosome, complete genome1e-131478BLASTN svgBLASTP svg
NC_020291:48158534815853483840422552Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome1e-1799.6BLASTN svgBLASTP svg
NC_020134:19415231941523198006638544Clostridium stercorarium subsp. stercorarium DSM 8532, complete3e-0661.9BLASTN svgBLASTP svg