Query: NC_011982:130199 Agrobacterium vitis S4 plasmid pTiS4, complete sequence
Start: 130199, End: 150673, Length: 20475
Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria
General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_011982:206784 | 206784 | 231681 | 24898 | Agrobacterium vitis S4 plasmid pTiS4, complete sequence | 3e-129 | 470 | BLASTN svg | BLASTP svg |
NC_009937:3748885* | 3748885 | 3769632 | 20748 | Azorhizobium caulinodans ORS 571, complete genome | 5e-26 | 127 | BLASTN svg | BLASTP svg |
NC_014664:2669562 | 2669562 | 2691139 | 21578 | Rhodomicrobium vannielii ATCC 17100 chromosome, complete genome | 4e-17 | 97.6 | BLASTN svg | BLASTP svg |
NC_009937:4350132 | 4350132 | 4374099 | 23968 | Azorhizobium caulinodans ORS 571, complete genome | 7e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_003317:1443874 | 1443874 | 1465651 | 21778 | Brucella melitensis 16M chromosome I, complete sequence | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_004310:508483* | 508483 | 534885 | 26403 | Brucella suis 1330 chromosome I, complete sequence | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_006932:531000* | 531000 | 557099 | 26100 | Brucella abortus biovar 1 str. 9-941 chromosome I, complete | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_007618:526400 | 526400 | 552796 | 26397 | Brucella melitensis biovar Abortus 2308 chromosome I, complete | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_010169:527500* | 527500 | 552871 | 25372 | Brucella suis ATCC 23445 chromosome I, complete sequence | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_010170:1470755* | 1470755 | 1490008 | 19254 | Bordetella petrii, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_010742:529500* | 529500 | 554817 | 25318 | Brucella abortus S19 chromosome 1, complete sequence | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_015857:531314* | 531314 | 556835 | 25522 | Brucella pinnipedialis B2/94 chromosome chromosome 1, complete | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_008435:1215437* | 1215437 | 1312091 | 96655 | Rhodopseudomonas palustris BisA53, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_004463:5722468 | 5722468 | 5742218 | 19751 | Bradyrhizobium japonicum USDA 110, complete genome | 2e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_008048:389645 | 389645 | 427599 | 37955 | Sphingopyxis alaskensis RB2256, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_010581:2999002 | 2999002 | 3046489 | 47488 | Beijerinckia indica subsp. indica ATCC 9039, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_019973:5838000* | 5838000 | 5862599 | 24600 | Mesorhizobium australicum WSM2073, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_015675:6464000 | 6464000 | 6488099 | 24100 | Mesorhizobium opportunistum WSM2075 chromosome, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_014923:5909000 | 5909000 | 5933599 | 24600 | Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_004463:18497 | 18497 | 46265 | 27769 | Bradyrhizobium japonicum USDA 110, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_007489:42500 | 42500 | 66787 | 24288 | Rhodobacter sphaeroides 2.4.1 plasmid C, complete sequence | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_006677:1596560* | 1596560 | 1665422 | 68863 | Gluconobacter oxydans 621H, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_010103:507482* | 507482 | 532336 | 24855 | Brucella canis ATCC 23365 chromosome I, complete sequence | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_019940:2236630* | 2236630 | 2258111 | 21482 | Thioflavicoccus mobilis 8321 chromosome, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_019940:2485000 | 2485000 | 2504828 | 19829 | Thioflavicoccus mobilis 8321 chromosome, complete genome | 1e-05 | 60 | BLASTN svg | BLASTP svg |
NC_019973:5899142* | 5899142 | 5931794 | 32653 | Mesorhizobium australicum WSM2073, complete genome | 1e-05 | 60 | BLASTN svg | BLASTP svg |
NC_015675:6538500 | 6538500 | 6557505 | 19006 | Mesorhizobium opportunistum WSM2075 chromosome, complete genome | 1e-05 | 60 | BLASTN svg | BLASTP svg |
NC_014923:5970182 | 5970182 | 6002837 | 32656 | Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete | 1e-05 | 60 | BLASTN svg | BLASTP svg |