Pre_GI: BLASTN Hits

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Query: NC_011963:1979136 Rhodobacter sphaeroides KD131 chromosome 1, complete sequence

Start: 1979136, End: 2000185, Length: 21050

Host Lineage: Rhodobacter sphaeroides; Rhodobacter; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: Halophilic, purple nonsulfur photosynthetic bacterium. Capable of producing high levels of biohydrogen (H2). Originally isolated from sea mud off the coast of DaeBu Island, South Korea. Bacteria belonging to the Rhodobacter group are metabolically versatile as they are able to grow using photosynthesis, chemosynthesis, and usually can grow under both anaerobic and aerobic conditions. The most extensively studied bacteria with regards to its photosynthetic capabilities which includes the structure, function and regulation of its photosynthetic membranes, its mechanisms of CO2 and nitrogen fixation, cytochrome diversity and its electron transport systems. It can grow aerobically and anaerobically in the light and anaerobically in the dark. It produces an intracytoplasmic membrane system consisting of membrane invaginations where the light harvesting complexes (LH1 and LH2) and the reaction center are synthesized. Furthermore, it has the ability to detoxify metal oxides and oxyanions and hence has a role in bioremediation.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_011958:73575573575578945053696Rhodobacter sphaeroides KD131 chromosome 2, complete genome02111BLASTN svgBLASTP svg
NC_009040:43791*437916586622076Rhodobacter sphaeroides ATCC 17029 plasmid pRSPH01, complete5e-20107BLASTN svgBLASTP svg
NC_015976:1893076*1893076193522042145Sphingobium sp. SYK-6, complete genome7e-19103BLASTN svgBLASTP svg
NC_014221:17861221786122181060724486Truepera radiovictrix DSM 17093 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_009050:427000*42700045201225013Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequence1e-1489.7BLASTN svgBLASTP svg
NC_009050:567209*56720959401626808Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_003911:1078949*1078949111287933931Silicibacter pomeroyi DSS-3, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_014034:13948981394898141709922202Rhodobacter capsulatus SB1003 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_014960:13805001380500140335922860Anaerolinea thermophila UNI-1, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_015677:36854523685452370903723586Ramlibacter tataouinensis TTB310 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_005085:1269787*1269787132843458648Chromobacterium violaceum ATCC 12472, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_008741:15699156993810522407Desulfovibrio vulgaris subsp. vulgaris DP4 plasmid pDVUL01,1e-0560BLASTN svgBLASTP svg
NC_008254:3246306*3246306327014823843Mesorhizobium sp. BNC1, complete genome1e-0560BLASTN svgBLASTP svg