Query: NC_011769:3712497 Desulfovibrio vulgaris str. 'Miyazaki F', complete genome
Start: 3712497, End: 3732328, Length: 19832
Host Lineage: Desulfovibrio vulgaris; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria
General Information: Desulfovibrio vulgaris str. 'Miyazaki F' has one of the best characterized nickel/iron hydrogenases. A sulfate reducing bacterium. These organisms typically grow anaerobically, although some can tolerate oxygen, and they utilize a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making these organisms of interest as bioremediators. Metal corrosion, a problem that is partly the result of the collective activity of these bacteria, produces billions of dollars in losses each year to the petroleum industry. These organisms are also responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products. This species is a sulfate reducer commonly found in a variety of soil and aquatic environments.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_011883:1182000* | 1182000 | 1203915 | 21916 | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774, | 2e-37 | 165 | BLASTN svg | BLASTP svg |
NC_008260:2961291 | 2961291 | 2984267 | 22977 | Alcanivorax borkumensis SK2, complete genome | 5e-29 | 137 | BLASTN svg | BLASTP svg |
NC_015052:1771976* | 1771976 | 1800283 | 28308 | Bifidobacterium longum subsp. infantis 157F, complete genome | 1e-23 | 119 | BLASTN svg | BLASTP svg |
NC_013223:2609697* | 2609697 | 2645307 | 35611 | Desulfohalobium retbaense DSM 5692, complete genome | 1e-23 | 119 | BLASTN svg | BLASTP svg |
NC_010816:2326453* | 2326453 | 2353688 | 27236 | Bifidobacterium longum DJO10A, complete genome | 1e-23 | 119 | BLASTN svg | BLASTP svg |
NC_004307:2208591* | 2208591 | 2236917 | 28327 | Bifidobacterium longum NCC2705, complete genome | 3e-21 | 111 | BLASTN svg | BLASTP svg |
NC_015563:1129469 | 1129469 | 1160178 | 30710 | Delftia sp. Cs1-4 chromosome, complete genome | 4e-20 | 107 | BLASTN svg | BLASTP svg |
NC_008358:798390 | 798390 | 839343 | 40954 | Hyphomonas neptunium ATCC 15444, complete genome | 4e-17 | 97.6 | BLASTN svg | BLASTP svg |
NC_009439:442890 | 442890 | 489008 | 46119 | Pseudomonas mendocina ymp, complete genome | 2e-16 | 95.6 | BLASTN svg | BLASTP svg |
NC_021066:1712905* | 1712905 | 1758596 | 45692 | Raoultella ornithinolytica B6, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_015593:203000* | 203000 | 235196 | 32197 | Sphingobium chlorophenolicum L-1 chromosome chromosome 1, complete | 4e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_015312:3675148* | 3675148 | 3746064 | 70917 | Pseudonocardia dioxanivorans CB1190 chromosome, complete genome | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_014972:1035124 | 1035124 | 1062273 | 27150 | Desulfobulbus propionicus DSM 2032 chromosome, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_015578:3266855 | 3266855 | 3289389 | 22535 | Treponema primitia ZAS-2 chromosome, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_011769:787496 | 787496 | 811831 | 24336 | Desulfovibrio vulgaris str. 'Miyazaki F', complete genome | 6e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_007512:771975 | 771975 | 814632 | 42658 | Pelodictyon luteolum DSM 273, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_007760:3655433 | 3655433 | 3696187 | 40755 | Anaeromyxobacter dehalogenans 2CP-C, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_015061:3801927 | 3801927 | 3826328 | 24402 | Rahnella sp. Y9602 chromosome, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_015580:3779724* | 3779724 | 3809094 | 29371 | Novosphingobium sp. PP1Y, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_010805:530876* | 530876 | 561440 | 30565 | Burkholderia multivorans ATCC 17616 chromosome 2, complete | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_014006:1204500 | 1204500 | 1223667 | 19168 | Sphingobium japonicum UT26S chromosome 1, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_014828:2657623* | 2657623 | 2681078 | 23456 | Ethanoligenens harbinense YUAN-3 chromosome, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_010086:1907959* | 1907959 | 1940275 | 32317 | Burkholderia multivorans ATCC 17616 chromosome 2, complete | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_010634:2252329* | 2252329 | 2274098 | 21770 | Yersinia pseudotuberculosis PB1/+, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_008150:1543635 | 1543635 | 1565953 | 22319 | Yersinia pestis Antiqua, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_008149:1669921 | 1669921 | 1691834 | 21914 | Yersinia pestis Nepal516, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_006155:2334122 | 2334122 | 2355106 | 20985 | Yersinia pseudotuberculosis IP 32953, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_005810:2043730 | 2043730 | 2064099 | 20370 | Yersinia pestis biovar Microtus str. 91001, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_004088:2541033 | 2541033 | 2563883 | 22851 | Yersinia pestis KIM, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_003143:2258636 | 2258636 | 2278435 | 19800 | Yersinia pestis CO92, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_015968:1618862 | 1618862 | 1641275 | 22414 | Enterobacter asburiae LF7a chromosome, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_018750:3141196* | 3141196 | 3160473 | 19278 | Streptomyces venezuelae ATCC 10712, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
NC_015385:2505977* | 2505977 | 2549905 | 43929 | Treponema succinifaciens DSM 2489 chromosome, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
NC_014541:643604* | 643604 | 668166 | 24563 | Ferrimonas balearica DSM 9799 chromosome, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
NC_010473:247429 | 247429 | 272099 | 24671 | Escherichia coli str. K-12 substr. DH10B, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
NC_009439:4734237 | 4734237 | 4756350 | 22114 | Pseudomonas mendocina ymp, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
NC_008786:18688 | 18688 | 42623 | 23936 | Verminephrobacter eiseniae EF01-2, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
NC_000913:272071 | 272071 | 301797 | 29727 | Escherichia coli K12, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
AC_000091:273325 | 273325 | 301797 | 28473 | Escherichia coli W3110 DNA, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |