Query: NC_011660:2509362 Listeria monocytogenes HCC23 chromosome, complete genome
Start: 2509362, End: 2532230, Length: 22869
Host Lineage: Listeria monocytogenes; Listeria; Listeriaceae; Bacillales; Firmicutes; Bacteria
General Information: Listeria monocytogenes HCC23 was isolated from channel catfish. This organism, which causes listeriosis, is one of the leading causes of death from food-borne pathogens especially in pregnant women, newborns, the elderly, and immunocompromised individuals. It is found in environments such as decaying vegetable matter, sewage, water, and soil, and it can survive extremes of both temperatures (1-45 degrees C) and salt concentration marking it as an extremely dangerous food-born pathogen, especially on food that is not reheated. This organism is enteroinvasive, and utilizes an actin-based motility system by using a surface protein, ActA, that promotes actin polymerization, to spread intercellularly using the polymerized cytoskeletal protein as a "motor". There are 13 serovars associated with Listeria monocytogenes, and the serovar 4b strains are more commonly associated with invasive disease.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_008555:444927 | 444927 | 470355 | 25429 | Listeria welshimeri serovar 6b str. SLCC5334, complete genome | 0 | 1376 | BLASTN svg | BLASTP svg |
NC_013891:575746 | 575746 | 596066 | 20321 | Listeria seeligeri serovar 1/2b str. SLCC3954, complete genome | 0 | 1310 | BLASTN svg | BLASTP svg |
NC_010723:1379256 | 1379256 | 1400622 | 21367 | Clostridium botulinum E3 str. Alaska E43, complete genome | 1e-54 | 222 | BLASTN svg | BLASTP svg |
NC_008261:967973 | 967973 | 988635 | 20663 | Clostridium perfringens ATCC 13124, complete genome | 3e-49 | 204 | BLASTN svg | BLASTP svg |
NC_015975:1936504* | 1936504 | 1961019 | 24516 | Lactobacillus ruminis ATCC 27782 chromosome, complete genome | 3e-40 | 174 | BLASTN svg | BLASTP svg |
NC_013192:469771* | 469771 | 496517 | 26747 | Leptotrichia buccalis DSM 1135, complete genome | 2e-22 | 115 | BLASTN svg | BLASTP svg |
NC_005362:1870620* | 1870620 | 1894023 | 23404 | Lactobacillus johnsonii NCC 533, complete genome | 3e-18 | 101 | BLASTN svg | BLASTP svg |
NC_003210:870587 | 870587 | 889502 | 18916 | Listeria monocytogenes EGD-e, complete genome | 5e-17 | 97.6 | BLASTN svg | BLASTP svg |
NC_008530:1775841* | 1775841 | 1797841 | 22001 | Lactobacillus gasseri ATCC 33323, complete genome | 8e-16 | 93.7 | BLASTN svg | BLASTP svg |
NC_006814:403723* | 403723 | 445632 | 41910 | Lactobacillus acidophilus NCFM, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_018528:1681060* | 1681060 | 1707291 | 26232 | Lactobacillus helveticus R0052 chromosome, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_015214:437733* | 437733 | 482599 | 44867 | Lactobacillus acidophilus 30SC chromosome, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_014724:439594* | 439594 | 485644 | 46051 | Lactobacillus amylovorus GRL 1112 chromosome, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_014106:419511* | 419511 | 456808 | 37298 | Lactobacillus crispatus ST1, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_015602:1339067* | 1339067 | 1365766 | 26700 | Lactobacillus kefiranofaciens ZW3 chromosome, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_013171:228356* | 228356 | 254889 | 26534 | Anaerococcus prevotii DSM 20548, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_020207:1795993 | 1795993 | 1819114 | 23122 | Enterococcus faecium NRRL B-2354, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_011830:3081726* | 3081726 | 3102147 | 20422 | Desulfitobacterium hafniense DCB-2, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |