Pre_GI: BLASTN Hits

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Query: NC_011660:1889504 Listeria monocytogenes HCC23 chromosome, complete genome

Start: 1889504, End: 1915176, Length: 25673

Host Lineage: Listeria monocytogenes; Listeria; Listeriaceae; Bacillales; Firmicutes; Bacteria

General Information: Listeria monocytogenes HCC23 was isolated from channel catfish. This organism, which causes listeriosis, is one of the leading causes of death from food-borne pathogens especially in pregnant women, newborns, the elderly, and immunocompromised individuals. It is found in environments such as decaying vegetable matter, sewage, water, and soil, and it can survive extremes of both temperatures (1-45 degrees C) and salt concentration marking it as an extremely dangerous food-born pathogen, especially on food that is not reheated. This organism is enteroinvasive, and utilizes an actin-based motility system by using a surface protein, ActA, that promotes actin polymerization, to spread intercellularly using the polymerized cytoskeletal protein as a "motor". There are 13 serovars associated with Listeria monocytogenes, and the serovar 4b strains are more commonly associated with invasive disease.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_002973:73094273094275992628985Listeria monocytogenes str. 4b F2365, complete genome012490BLASTN svgBLASTP svg
NC_003212:72111272111274471523604Listeria innocua Clip11262, complete genome09686BLASTN svgBLASTP svg
NC_003210:72182472182474340121578Listeria monocytogenes EGD-e, complete genome09601BLASTN svgBLASTP svg
NC_008555:69621769621771552919313Listeria welshimeri serovar 6b str. SLCC5334, complete genome07519BLASTN svgBLASTP svg
NC_013891:640784*64078466809927316Listeria seeligeri serovar 1/2b str. SLCC3954, complete genome04706BLASTN svgBLASTP svg
NC_016011:67841967841969889020472Listeria ivanovii subsp. ivanovii PAM 55, complete genome04573BLASTN svgBLASTP svg
NC_011772:15756741575674159903823365Bacillus cereus G9842, complete genome4e-21111BLASTN svgBLASTP svg