Query: NC_011593:712443 Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,
Start: 712443, End: 732806, Length: 20364
Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria
General Information: This strain was isolated from human infant feces. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium longum is found in adult humans and formula fed infants as a normal component of gut flora.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_008618:1456000* | 1456000 | 1481099 | 25100 | Bifidobacterium adolescentis ATCC 15703, complete genome | 0 | 1219 | BLASTN svg | BLASTP svg |
NC_012815:1494263 | 1494263 | 1524877 | 30615 | Bifidobacterium animalis subsp. lactis DSM 10140, complete genome | 7e-130 | 472 | BLASTN svg | BLASTP svg |
NC_012814:1494331 | 1494331 | 1522599 | 28269 | Bifidobacterium animalis subsp. lactis Bl-04, complete genome | 7e-130 | 472 | BLASTN svg | BLASTP svg |
NC_015588:1847500 | 1847500 | 1878183 | 30684 | Isoptericola variabilis 225 chromosome, complete genome | 1e-32 | 149 | BLASTN svg | BLASTP svg |
NC_013093:5791961 | 5791961 | 5817448 | 25488 | Actinosynnema mirum DSM 43827, complete genome | 7e-19 | 103 | BLASTN svg | BLASTP svg |
NC_015389:114469 | 114469 | 139225 | 24757 | Coriobacterium glomerans PW2 chromosome, complete genome | 1e-17 | 99.6 | BLASTN svg | BLASTP svg |
NC_012814:23000 | 23000 | 53442 | 30443 | Bifidobacterium animalis subsp. lactis Bl-04, complete genome | 7e-16 | 93.7 | BLASTN svg | BLASTP svg |
NC_012815:23000 | 23000 | 53442 | 30443 | Bifidobacterium animalis subsp. lactis DSM 10140, complete genome | 7e-16 | 93.7 | BLASTN svg | BLASTP svg |
NC_009921:522000 | 522000 | 562102 | 40103 | Frankia sp. EAN1pec, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_009921:3666898 | 3666898 | 3740718 | 73821 | Frankia sp. EAN1pec, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_005085:659378* | 659378 | 684566 | 25189 | Chromobacterium violaceum ATCC 12472, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_004307:1815825 | 1815825 | 1848775 | 32951 | Bifidobacterium longum NCC2705, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_009664:4423829* | 4423829 | 4686013 | 262185 | Kineococcus radiotolerans SRS30216, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
NC_008702:2520500 | 2520500 | 2551732 | 31233 | Azoarcus sp. BH72, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |