Pre_GI: BLASTN Hits

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Query: NC_011004:3582078 Rhodopseudomonas palustris TIE-1, complete genome

Start: 3582078, End: 3602790, Length: 20713

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from an iron-rich microbial mat from School Street Marsh in Woods Hole, MA, USA. It grows photoautotrophically with Fe(II), H2, or thiosulfate as the electron donor, photoheterotrophically with a variety of organic carbon sources and chemoheterotrophically in the dark. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010172:11997251199725121859918875Methylobacterium extorquens PA1, complete genome01007BLASTN svgBLASTP svg
NC_011757:12460001246000128589739898Methylobacterium chloromethanicum CM4, complete genome0981BLASTN svgBLASTP svg
NC_014217:1352777*1352777137649123715Starkeya novella DSM 506 chromosome, complete genome0684BLASTN svgBLASTP svg
NC_013854:33054333054335359923057Azospirillum sp. B510, complete genome2e-136494BLASTN svgBLASTP svg
NC_007778:28759732875973289899723025Rhodopseudomonas palustris HaA2, complete genome1e-97365BLASTN svgBLASTP svg
NC_013169:1759900*1759900178341323514Kytococcus sedentarius DSM 20547, complete genome9e-34153BLASTN svgBLASTP svg
NC_014830:16021981602198162425922062Intrasporangium calvum DSM 43043 chromosome, complete genome3e-24121BLASTN svgBLASTP svg
NC_015577:862659*86265988387621218Treponema azotonutricium ZAS-9 chromosome, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_015064:92709692709694684319748Acidobacterium sp. MP5ACTX9 chromosome, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_014008:12466421246642127117924538Coraliomargarita akajimensis DSM 45221 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg