Query: NC_010816:2252732 Bifidobacterium longum DJO10A, complete genome
Start: 2252732, End: 2274705, Length: 21974
Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria
General Information: This organism is found in adult humans and formula fed infants as a normal component of gut flora. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_013521:3204250* | 3204250 | 3245489 | 41240 | Sanguibacter keddieii DSM 10542, complete genome | 9e-34 | 153 | BLASTN svg | BLASTP svg |
NC_014924:3334386 | 3334386 | 3361135 | 26750 | Pseudoxanthomonas suwonensis 11-1 chromosome, complete genome | 2e-31 | 145 | BLASTN svg | BLASTP svg |
NC_013235:1325975 | 1325975 | 1349705 | 23731 | Nakamurella multipartita DSM 44233, complete genome | 2e-19 | 105 | BLASTN svg | BLASTP svg |
NC_010407:3174470 | 3174470 | 3197545 | 23076 | Clavibacter michiganensis subsp. sepedonicus chromosome, complete | 8e-19 | 103 | BLASTN svg | BLASTP svg |
NC_020126:4622371 | 4622371 | 4654247 | 31877 | Myxococcus stipitatus DSM 14675, complete genome | 1e-17 | 99.6 | BLASTN svg | BLASTP svg |
NC_015733:1179977 | 1179977 | 1198099 | 18123 | Pseudomonas putida S16 chromosome, complete genome | 2e-16 | 95.6 | BLASTN svg | BLASTP svg |
NC_008463:1293079 | 1293079 | 1330193 | 37115 | Pseudomonas aeruginosa UCBPP-PA14, complete genome | 2e-16 | 95.6 | BLASTN svg | BLASTP svg |
NC_007963:814148 | 814148 | 840843 | 26696 | Chromohalobacter salexigens DSM 3043, complete genome | 2e-16 | 95.6 | BLASTN svg | BLASTP svg |
NC_013715:2154695 | 2154695 | 2177599 | 22905 | Rothia mucilaginosa DY-18, complete genome | 7e-16 | 93.7 | BLASTN svg | BLASTP svg |
NC_011071:1877500 | 1877500 | 1902614 | 25115 | Stenotrophomonas maltophilia R551-3, complete genome | 3e-15 | 91.7 | BLASTN svg | BLASTP svg |
NC_007005:1415962 | 1415962 | 1437233 | 21272 | Pseudomonas syringae pv. syringae B728a, complete genome | 3e-15 | 91.7 | BLASTN svg | BLASTP svg |
NC_002516:1031386* | 1031386 | 1091964 | 60579 | Pseudomonas aeruginosa PAO1, complete genome | 3e-15 | 91.7 | BLASTN svg | BLASTP svg |
NC_018681:1021063* | 1021063 | 1046805 | 25743 | Nocardia brasiliensis ATCC 700358 chromosome, complete genome | 7e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_015957:10505870 | 10505870 | 10528082 | 22213 | Streptomyces violaceusniger Tu 4113 chromosome, complete genome | 7e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_015947:1877887 | 1877887 | 1900232 | 22346 | Burkholderia sp. JV3 chromosome, complete genome | 7e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_012779:3016327 | 3016327 | 3040890 | 24564 | Edwardsiella ictaluri 93-146, complete genome | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_015138:2069739 | 2069739 | 2100742 | 31004 | Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_019960:1198067* | 1198067 | 1228263 | 30197 | Prevotella dentalis DSM 3688 chromosome 1, complete sequence | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_014844:2638994 | 2638994 | 2658550 | 19557 | Desulfovibrio aespoeensis Aspo-2 chromosome, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_015566:4049000 | 4049000 | 4069099 | 20100 | Serratia sp. AS12 chromosome, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_018681:5378197 | 5378197 | 5418599 | 40403 | Nocardia brasiliensis ATCC 700358 chromosome, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_014836:1052214* | 1052214 | 1076589 | 24376 | Desulfurispirillum indicum S5 chromosome, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_010943:2091199 | 2091199 | 2115100 | 23902 | Stenotrophomonas maltophilia K279a, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_014532:722151* | 722151 | 741140 | 18990 | Halomonas elongata DSM 2581, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_014910:966761* | 966761 | 992567 | 25807 | Alicycliphilus denitrificans BC chromosome, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_015422:910292* | 910292 | 936778 | 26487 | Alicycliphilus denitrificans K601 chromosome, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_014973:3290545* | 3290545 | 3318703 | 28159 | Geobacter sp. M18 chromosome, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_021064:303635 | 303635 | 328437 | 24803 | Propionibacterium avidum 44067, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_019673:7738588* | 7738588 | 7757618 | 19031 | Saccharothrix espanaensis DSM 44229 complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_002928:1351750 | 1351750 | 1375495 | 23746 | Bordetella parapertussis 12822, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_020064:3517500 | 3517500 | 3541335 | 23836 | Serratia marcescens FGI94, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_014910:2015627* | 2015627 | 2038407 | 22781 | Alicycliphilus denitrificans BC chromosome, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |