Pre_GI: BLASTN Hits

Some Help

Query: NC_010645:1496816 Bordetella avium 197N, complete genome

Start: 1496816, End: 1516838, Length: 20023

Host Lineage: Bordetella avium; Bordetella; Alcaligenaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain is a spontaneous nalidixic acid-resistant derivative of virulent strain 197. This group of organisms is capable of invading the respiratory tract of animals and causing severe diseases. They express a number of virulence factors in order to do this including filamentous hemagglutins for attachment, cytotoxins, and proteins that form a type III secretion system for transport of effector molecules into host cells. This organism infects the respiratory tract of birds, and causes bordetellosis in commercially important animals such as turkeys, resulting in devastating losses every year due to secondary infections.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010645:406794*40679445127044477Bordetella avium 197N, complete genome09628BLASTN svgBLASTP svg
NC_002927:23385492338549238749248944Bordetella bronchiseptica RB50, complete genome4e-48200BLASTN svgBLASTP svg
NC_010645:36940836940840678237375Bordetella avium 197N, complete genome4e-45190BLASTN svgBLASTP svg
NC_007650:2429307*2429307246662437318Burkholderia thailandensis E264 chromosome II, complete sequence1e-1179.8BLASTN svgBLASTP svg
NC_002927:37168943716894377039253499Bordetella bronchiseptica RB50, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_015733:27201832720183276059940417Pseudomonas putida S16 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_016002:20373742037374208061443241Pseudogulbenkiania sp. NH8B, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010002:37530003753000377388020881Delftia acidovorans SPH-1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012559:85450785450789459940093Laribacter hongkongensis HLHK9, complete genome9e-0660BLASTN svgBLASTP svg