Pre_GI: BLASTN Hits

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Query: NC_010612:5236229 Mycobacterium marinum M, complete genome

Start: 5236229, End: 5256099, Length: 19871

Host Lineage: Mycobacterium marinum; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium marinum is commonly found in fresh and salt water in North America. This bacterium, a close relative of M. tuberculosis, causes a tuberculosis-like disease in frogs, fish and other cold-blooded animals, and a peripheral granulomatous disease in humans. Human infections can be persistent and may lead to systemic infection and arthritis. M. marinum is photochromogenic, i.e. it produces bright yellow pigmentation (mainly beta-carotene) upon exposure to visible light. Infection is followed by a 2-8 week incubation period resulting in suppuration (pus) and organized ulcerating granulomas (tumorous lesions), predominantly localized in lymphatic and tendon sheaths, and cooler body tissues in the extremities.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_020133:48419324841932485992417993Mycobacterium liflandii 128FXT, complete genome08389BLASTN svgBLASTP svg
NC_008595:2432184*2432184245655424371Mycobacterium avium 104, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_002944:18814051881405190464023236Mycobacterium avium subsp. paratuberculosis K-10, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_002944:41474314147431417353826108Mycobacterium avium subsp. paratuberculosis K-10, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_008595:25466962546696258480338108Mycobacterium avium 104, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012880:91369891369893533721640Dickeya dadantii Ech703, complete genome1e-0765.9BLASTN svgBLASTP svg