Pre_GI: BLASTN Hits

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Query: NC_010498:3838419 Escherichia coli SMS-3-5, complete genome

Start: 3838419, End: 3866836, Length: 28418

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli SMS-3-5 was isolated from a toxic-metal contaminated site, Shipyard Creek, Charleston, South Carolina, USA. This strain is highly resistant to a number of antibiotics. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_011751:40745864074586409524320658Escherichia coli UMN026 chromosome, complete genome037600BLASTN svgBLASTP svg
CP002185:38224703822470385930636837Escherichia coli W, complete genome028540BLASTN svgBLASTP svg
NC_011748:39834323983432403268849257Escherichia coli 55989, complete genome024460BLASTN svgBLASTP svg
CU928145:39834323983432403268849257Escherichia coli 55989 chromosome, complete genome024460BLASTN svgBLASTP svg
NC_004337:3590323*35903233952993362671Shigella flexneri 2a str. 301, complete genome021200BLASTN svgBLASTP svg
NC_010473:37225713722571375929536725Escherichia coli str. K-12 substr. DH10B, complete genome018990BLASTN svgBLASTP svg
NC_000913:3624826*3624826366560340778Escherichia coli K12, complete genome018990BLASTN svgBLASTP svg
NC_007613:34703143470314350909338780Shigella boydii Sb227, complete genome018890BLASTN svgBLASTP svg
NC_010468:23100023100025334622347Escherichia coli ATCC 8739, complete genome017540BLASTN svgBLASTP svg
CP002516:24676724676726745320687Escherichia coli KO11, complete genome012310BLASTN svgBLASTP svg
NC_009800:3685651*3685651370909923449Escherichia coli HS, complete genome012240BLASTN svgBLASTP svg
NC_004741:41605004160500418981229313Shigella flexneri 2a str. 2457T, complete genome011550BLASTN svgBLASTP svg
NC_007384:38970003897000391653419535Shigella sonnei Ss046, complete genome011540BLASTN svgBLASTP svg
NC_008258:35505003550500357858028081Shigella flexneri 5 str. 8401, complete genome011520BLASTN svgBLASTP svg
NC_004741:41320564132056415578223727Shigella flexneri 2a str. 2457T, complete genome010470BLASTN svgBLASTP svg
AC_000091:39952333995233402122325991Escherichia coli W3110 DNA, complete genome010390BLASTN svgBLASTP svg
CU928145:39585723958572397962121050Escherichia coli 55989 chromosome, complete genome010390BLASTN svgBLASTP svg
NC_011748:39585723958572397962121050Escherichia coli 55989, complete genome010390BLASTN svgBLASTP svg
NC_008258:35815833581583360816926587Shigella flexneri 5 str. 8401, complete genome08601BLASTN svgBLASTP svg
NC_009801:39569173956917397533818422Escherichia coli E24377A, complete genome08437BLASTN svgBLASTP svg
CU928160:37090813709081373009921019Escherichia coli IAI1 chromosome, complete genome08437BLASTN svgBLASTP svg
AC_000091:39768883976888399503018143Escherichia coli W3110 DNA, complete genome08310BLASTN svgBLASTP svg
AP010958:43134624313462433479021329Escherichia coli O103:H2 str. 12009 DNA, complete genome06901BLASTN svgBLASTP svg
NC_004337:36219853621985364626824284Shigella flexneri 2a str. 301, complete genome05985BLASTN svgBLASTP svg
NC_010658:36226103622610364133018721Shigella boydii CDC 3083-94, complete genome04014BLASTN svgBLASTP svg
NC_007384:37417083741708376309921392Shigella sonnei Ss046, complete genome02543BLASTN svgBLASTP svg
NC_006905:37173063717306374009922794Salmonella enterica subsp. enterica serovar Choleraesuis str02391BLASTN svgBLASTP svg
NC_014121:50000695000069503057530507Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete02345BLASTN svgBLASTP svg
NC_009778:41880004188000423044042441Enterobacter sakazakii ATCC BAA-894, complete genome01695BLASTN svgBLASTP svg
NC_010102:45570374557037457661219576Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,01019BLASTN svgBLASTP svg
NC_010473:2839902*2839902288978149880Escherichia coli str. K-12 substr. DH10B, complete genome1e-89339BLASTN svgBLASTP svg
NC_000913:2746886*2746886280151454629Escherichia coli K12, complete genome1e-89339BLASTN svgBLASTP svg
AC_000091:2747520*2747520280214854629Escherichia coli W3110 DNA, complete genome1e-89339BLASTN svgBLASTP svg
NC_009832:25963442596344262148625143Serratia proteamaculans 568, complete genome1e-82315BLASTN svgBLASTP svg
NC_010067:1829041*1829041185794928909Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete1e-67266BLASTN svgBLASTP svg
NC_010634:44637274463727449917835452Yersinia pseudotuberculosis PB1/+, complete genome3e-65258BLASTN svgBLASTP svg
NC_002695:38522333852233387887626644Escherichia coli O157:H7 str. Sakai, complete genome1e-64256BLASTN svgBLASTP svg
NC_002655:39195453919545394618926645Escherichia coli O157:H7 EDL933, complete genome1e-64256BLASTN svgBLASTP svg
NC_011083:3171171*3171171319192520755Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,1e-42182BLASTN svgBLASTP svg
NC_010814:36739833673983369691022928Geobacter lovleyi SZ, complete genome2e-35159BLASTN svgBLASTP svg
NC_011740:28599332859933288499725065Escherichia fergusonii ATCC 35469, complete genome5e-33151BLASTN svgBLASTP svg
NC_009348:47974479747089422921Aeromonas salmonicida subsp. salmonicida A449, complete genome4e-27131BLASTN svgBLASTP svg
NC_009092:43376174337617437380536189Shewanella loihica PV-4, complete genome3e-22115BLASTN svgBLASTP svg
NC_002505:16853216853220059932068Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete1e-21113BLASTN svgBLASTP svg
NC_015633:33800033800035668318684Vibrio anguillarum 775 chromosome chromosome I, complete sequence6e-20107BLASTN svgBLASTP svg
NC_012912:2800884*2800884281980818925Dickeya zeae Ech1591, complete genome6e-1797.6BLASTN svgBLASTP svg
NC_009348:3819271*3819271384615626886Aeromonas salmonicida subsp. salmonicida A449, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_008577:2818546*2818546284622227677Shewanella sp. ANA-3 chromosome 1, complete sequence9e-1693.7BLASTN svgBLASTP svg
NC_008570:4009762*4009762403215322392Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_007973:18217531821753184776126009Ralstonia metallidurans CH34 chromosome 1, complete sequence2e-1385.7BLASTN svgBLASTP svg
NC_012880:36453043645304366681221509Dickeya dadantii Ech703, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_009138:46726846726851435347086Herminiimonas arsenicoxydans, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_013416:16493*164933535418862Aggregatibacter actinomycetemcomitans D11S-1, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_013416:386301*38630140838122081Aggregatibacter actinomycetemcomitans D11S-1, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_008392:10291341029134108217253039Burkholderia cepacia AMMD chromosome 3, complete sequence6e-1177.8BLASTN svgBLASTP svg
NC_013592:27033272703327272585222526Dickeya dadantii Ech586, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_012691:2614603*26146032727599112997Tolumonas auensis DSM 9187, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_010557:67965667965674320963554Burkholderia ambifaria MC40-6 chromosome 3, complete sequence9e-1073.8BLASTN svgBLASTP svg
NC_014500:20191132019113204779528683Dickeya dadantii 3937 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_009997:51882215188221522795839738Shewanella baltica OS195, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_002947:21576482157648219238834741Pseudomonas putida KT2440, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_018697:61883261883264338524554Cycloclasticus sp. P1 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015572:1974000*1974000199616522166Methylomonas methanica MC09 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_015138:41034574103457412794224486Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete5e-0867.9BLASTN svgBLASTP svg
NC_014375:21761221761224296425353Brevundimonas subvibrioides ATCC 15264 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013960:45249345249347193019438Nitrosococcus halophilus Nc4 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015567:23287822328782235384725066Serratia sp. AS9 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015566:23287712328771235231223542Serratia sp. AS12 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015424:748785*74878577389925115Aeromonas veronii B565 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013416:875758*87575890109925342Aggregatibacter actinomycetemcomitans D11S-1, complete genome3e-0661.9BLASTN svgBLASTP svg