Pre_GI: BLASTN Hits

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Query: NC_010475:1671823 Synechococcus sp. PCC 7002, complete genome

Start: 1671823, End: 1694321, Length: 22499

Host Lineage: Synechococcus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: The cyanobacterium Synechococcus sp. PCC 7002 (formerly known as Agmenellum quadruplicatum strain PR-6) was originally isolated in 1961 by Chase Van Baalen from an onshore, marine mud flat sample derived from fish pens on Maguyes Island, La Parguera, Puerto Rico. The organism grows in brackish (euryhaline/marine) water and is unicellular but tends to form short filaments of two to four cells during exponential growth at the temperature optimum of 38 degrees C. The strain is extremely tolerant of high light intensities and has been grown at light intensities equivalent to two suns. This unique combination of physiological and genetic properties have long made this strain an important model system to studies of the oxygenic photosynthetic apparatus, the regulation of carbon and nitrogen metabolism, and other aspects of cyanobacterial physiology and metabolism.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010296:5002428*5002428502497722550Microcystis aeruginosa NIES-843, complete genome6e-32147BLASTN svgBLASTP svg
NC_013131:8480384*8480384852686646483Catenulispora acidiphila DSM 44928, complete genome3e-21111BLASTN svgBLASTP svg
NC_011884:1541256*1541256157031329058Cyanothece sp. PCC 7425, complete genome8e-19103BLASTN svgBLASTP svg
NC_012815:1092795*1092795111559922805Bifidobacterium animalis subsp. lactis DSM 10140, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_012814:1092860*1092860111560222743Bifidobacterium animalis subsp. lactis Bl-04, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_007513:1388641*1388641142459935959Synechococcus sp. CC9902, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_005070:837567*83756786362826062Synechococcus sp. WH 8102, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_014318:7480669*7480669750464523977Amycolatopsis mediterranei U32 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_014165:2928464*2928464295012221659Thermobispora bispora DSM 43833 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_013205:289291*28929131395124661Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,3e-0971.9BLASTN svgBLASTP svg
NC_011830:4645453*4645453466825622804Desulfitobacterium hafniense DCB-2, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014657:673500*67350069431420815Caldicellulosiruptor owensensis OL chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_003919:1203405*1203405123359930195Xanthomonas axonopodis pv. citri str. 306, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_007645:2204066*2204066222275718692Hahella chejuensis KCTC 2396, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_007929:210088*21008823862428537Lactobacillus salivarius subsp. salivarius UCC118, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_008497:1111891*1111891114836436474Lactobacillus brevis ATCC 367, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_008525:664500*66450068827523776Pediococcus pentosaceus ATCC 25745, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_008609:39211133921113395241031298Pelobacter propionicus DSM 2379, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_009654:4253431*4253431427667923249Marinomonas sp. MWYL1, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_013739:2057781*2057781208021522435Conexibacter woesei DSM 14684, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_013851:2317091*2317091233893321843Allochromatium vinosum DSM 180 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014210:40530944053094407559922506Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,7e-0763.9BLASTN svgBLASTP svg
NC_015428:700479*70047972176721289Lactobacillus buchneri NRRL B-30929 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_008027:4953432*4953432497941825987Pseudomonas entomophila L48, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011768:1889853*1889853190959819746Desulfatibacillum alkenivorans AK-01, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015556:4074367*4074367410534530979Pseudomonas fulva 12-X chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_018721:25738972573897259326919373Psychroflexus torquis ATCC 700755 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_019904:37491603749160377365324494Echinicola vietnamensis DSM 17526 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007516:15611661561166159795036785Synechococcus sp. CC9605, complete genome3e-0661.9BLASTN svgBLASTP svg