Query: NC_010475:1671823 Synechococcus sp. PCC 7002, complete genome
Start: 1671823, End: 1694321, Length: 22499
Host Lineage: Synechococcus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria
General Information: The cyanobacterium Synechococcus sp. PCC 7002 (formerly known as Agmenellum quadruplicatum strain PR-6) was originally isolated in 1961 by Chase Van Baalen from an onshore, marine mud flat sample derived from fish pens on Maguyes Island, La Parguera, Puerto Rico. The organism grows in brackish (euryhaline/marine) water and is unicellular but tends to form short filaments of two to four cells during exponential growth at the temperature optimum of 38 degrees C. The strain is extremely tolerant of high light intensities and has been grown at light intensities equivalent to two suns. This unique combination of physiological and genetic properties have long made this strain an important model system to studies of the oxygenic photosynthetic apparatus, the regulation of carbon and nitrogen metabolism, and other aspects of cyanobacterial physiology and metabolism.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_010296:5002428* | 5002428 | 5024977 | 22550 | Microcystis aeruginosa NIES-843, complete genome | 6e-32 | 147 | BLASTN svg | BLASTP svg |
NC_013131:8480384* | 8480384 | 8526866 | 46483 | Catenulispora acidiphila DSM 44928, complete genome | 3e-21 | 111 | BLASTN svg | BLASTP svg |
NC_011884:1541256* | 1541256 | 1570313 | 29058 | Cyanothece sp. PCC 7425, complete genome | 8e-19 | 103 | BLASTN svg | BLASTP svg |
NC_012815:1092795* | 1092795 | 1115599 | 22805 | Bifidobacterium animalis subsp. lactis DSM 10140, complete genome | 1e-17 | 99.6 | BLASTN svg | BLASTP svg |
NC_012814:1092860* | 1092860 | 1115602 | 22743 | Bifidobacterium animalis subsp. lactis Bl-04, complete genome | 1e-17 | 99.6 | BLASTN svg | BLASTP svg |
NC_007513:1388641* | 1388641 | 1424599 | 35959 | Synechococcus sp. CC9902, complete genome | 7e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_005070:837567* | 837567 | 863628 | 26062 | Synechococcus sp. WH 8102, complete genome | 7e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_014318:7480669* | 7480669 | 7504645 | 23977 | Amycolatopsis mediterranei U32 chromosome, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_014165:2928464* | 2928464 | 2950122 | 21659 | Thermobispora bispora DSM 43833 chromosome, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_013205:289291* | 289291 | 313951 | 24661 | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446, | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_011830:4645453* | 4645453 | 4668256 | 22804 | Desulfitobacterium hafniense DCB-2, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_014657:673500* | 673500 | 694314 | 20815 | Caldicellulosiruptor owensensis OL chromosome, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_003919:1203405* | 1203405 | 1233599 | 30195 | Xanthomonas axonopodis pv. citri str. 306, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_007645:2204066* | 2204066 | 2222757 | 18692 | Hahella chejuensis KCTC 2396, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_007929:210088* | 210088 | 238624 | 28537 | Lactobacillus salivarius subsp. salivarius UCC118, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_008497:1111891* | 1111891 | 1148364 | 36474 | Lactobacillus brevis ATCC 367, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_008525:664500* | 664500 | 688275 | 23776 | Pediococcus pentosaceus ATCC 25745, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_008609:3921113 | 3921113 | 3952410 | 31298 | Pelobacter propionicus DSM 2379, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_009654:4253431* | 4253431 | 4276679 | 23249 | Marinomonas sp. MWYL1, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_013739:2057781* | 2057781 | 2080215 | 22435 | Conexibacter woesei DSM 14684, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_013851:2317091* | 2317091 | 2338933 | 21843 | Allochromatium vinosum DSM 180 chromosome, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_014210:4053094 | 4053094 | 4075599 | 22506 | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome, | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_015428:700479* | 700479 | 721767 | 21289 | Lactobacillus buchneri NRRL B-30929 chromosome, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_008027:4953432* | 4953432 | 4979418 | 25987 | Pseudomonas entomophila L48, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_011768:1889853* | 1889853 | 1909598 | 19746 | Desulfatibacillum alkenivorans AK-01, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_015556:4074367* | 4074367 | 4105345 | 30979 | Pseudomonas fulva 12-X chromosome, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_018721:2573897 | 2573897 | 2593269 | 19373 | Psychroflexus torquis ATCC 700755 chromosome, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_019904:3749160 | 3749160 | 3773653 | 24494 | Echinicola vietnamensis DSM 17526 chromosome, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_007516:1561166 | 1561166 | 1597950 | 36785 | Synechococcus sp. CC9605, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |