Pre_GI: BLASTN Hits

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Query: NC_010399:13222 Clavibacter michiganensis subsp. sepedonicus plasmid pCS1, complete

Start: 13222, End: 35599, Length: 22378

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism was first described and classified in 1914 as "Bacterium sepedonicus" and is considered a major plant pathogen. It is a phytopathogenic actinomycete that causes wilt and tuber rot in potato, which is a plant vascular disease with very high bacterial titers. Pathogenicity is believed to be associated with the presence of two plasmids, pCSL1 and pCSL2.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010407:151599*15159917558923991Clavibacter michiganensis subsp. sepedonicus chromosome, complete02123BLASTN svgBLASTP svg
NC_010407:32960*329605163318674Clavibacter michiganensis subsp. sepedonicus chromosome, complete02121BLASTN svgBLASTP svg
NC_010407:24061132406113242499918887Clavibacter michiganensis subsp. sepedonicus chromosome, complete02107BLASTN svgBLASTP svg
NC_010407:41091841091843527224355Clavibacter michiganensis subsp. sepedonicus chromosome, complete02097BLASTN svgBLASTP svg
NC_010407:20384992038499205674718249Clavibacter michiganensis subsp. sepedonicus chromosome, complete02095BLASTN svgBLASTP svg
NC_010407:31744703174470319754523076Clavibacter michiganensis subsp. sepedonicus chromosome, complete02089BLASTN svgBLASTP svg
NC_010407:31326833132683315489022208Clavibacter michiganensis subsp. sepedonicus chromosome, complete01493BLASTN svgBLASTP svg
NC_009480:31412314127854247131Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete0793BLASTN svgBLASTP svg
NC_009479:34001340015621322213Clavibacter michiganensis subsp. michiganensis NCPPB 382 plasmid8e-99369BLASTN svgBLASTP svg
NC_015514:47793547793550079522861Cellulomonas fimi ATCC 484 chromosome, complete genome3e-18101BLASTN svgBLASTP svg
NC_015514:18177318177320534923577Cellulomonas fimi ATCC 484 chromosome, complete genome3e-18101BLASTN svgBLASTP svg
NC_006087:22927912292791231485822068Leifsonia xyli subsp. xyli str. CTCB07, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_015125:32840953284095330809924005Microbacterium testaceum StLB037, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_010407:11144081114408113894624539Clavibacter michiganensis subsp. sepedonicus chromosome, complete4e-1177.8BLASTN svgBLASTP svg
NC_014391:46445004644500466983025331Micromonospora aurantiaca ATCC 27029 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg