Query: NC_010399:13222 Clavibacter michiganensis subsp. sepedonicus plasmid pCS1, complete
Start: 13222, End: 35599, Length: 22378
Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: This organism was first described and classified in 1914 as "Bacterium sepedonicus" and is considered a major plant pathogen. It is a phytopathogenic actinomycete that causes wilt and tuber rot in potato, which is a plant vascular disease with very high bacterial titers. Pathogenicity is believed to be associated with the presence of two plasmids, pCSL1 and pCSL2.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
---|
NC_010407:151599* | 151599 | 175589 | 23991 | Clavibacter michiganensis subsp. sepedonicus chromosome, complete | 0 | 2123 | BLASTN svg | BLASTP svg |
NC_010407:32960* | 32960 | 51633 | 18674 | Clavibacter michiganensis subsp. sepedonicus chromosome, complete | 0 | 2121 | BLASTN svg | BLASTP svg |
NC_010407:2406113 | 2406113 | 2424999 | 18887 | Clavibacter michiganensis subsp. sepedonicus chromosome, complete | 0 | 2107 | BLASTN svg | BLASTP svg |
NC_010407:410918 | 410918 | 435272 | 24355 | Clavibacter michiganensis subsp. sepedonicus chromosome, complete | 0 | 2097 | BLASTN svg | BLASTP svg |
NC_010407:2038499 | 2038499 | 2056747 | 18249 | Clavibacter michiganensis subsp. sepedonicus chromosome, complete | 0 | 2095 | BLASTN svg | BLASTP svg |
NC_010407:3174470 | 3174470 | 3197545 | 23076 | Clavibacter michiganensis subsp. sepedonicus chromosome, complete | 0 | 2089 | BLASTN svg | BLASTP svg |
NC_010407:3132683 | 3132683 | 3154890 | 22208 | Clavibacter michiganensis subsp. sepedonicus chromosome, complete | 0 | 1493 | BLASTN svg | BLASTP svg |
NC_009480:31412 | 31412 | 78542 | 47131 | Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete | 0 | 793 | BLASTN svg | BLASTP svg |
NC_009479:34001 | 34001 | 56213 | 22213 | Clavibacter michiganensis subsp. michiganensis NCPPB 382 plasmid | 8e-99 | 369 | BLASTN svg | BLASTP svg |
NC_015514:477935 | 477935 | 500795 | 22861 | Cellulomonas fimi ATCC 484 chromosome, complete genome | 3e-18 | 101 | BLASTN svg | BLASTP svg |
NC_015514:181773 | 181773 | 205349 | 23577 | Cellulomonas fimi ATCC 484 chromosome, complete genome | 3e-18 | 101 | BLASTN svg | BLASTP svg |
NC_006087:2292791 | 2292791 | 2314858 | 22068 | Leifsonia xyli subsp. xyli str. CTCB07, complete genome | 7e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_015125:3284095 | 3284095 | 3308099 | 24005 | Microbacterium testaceum StLB037, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_010407:1114408 | 1114408 | 1138946 | 24539 | Clavibacter michiganensis subsp. sepedonicus chromosome, complete | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_014391:4644500 | 4644500 | 4669830 | 25331 | Micromonospora aurantiaca ATCC 27029 chromosome, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |