Pre_GI: BLASTN Hits

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Query: NC_010162:9351179 Sorangium cellulosum 'So ce 56', complete genome

Start: 9351179, End: 9374415, Length: 23237

Host Lineage: Sorangium cellulosum; Sorangium; Polyangiaceae; Myxococcales; Proteobacteria; Bacteria

General Information: Sorangium cellulosum 'So ce 56' produces a large number of bioactive compounds, such as, the antifungal soraphen and the anticancer agent epothilone. This organism, like other myxobacteria, undergoes a complex development and differentiation pathway. When cell density increases, the organism switches to "social motility" where aggregates of cells can gather together into masses termed fruiting bodies that may consist of up to 100 000 cells. The motility system is not dependent on flagella like most bacteria, but instead relies on twitching pili: short extracellular appendages that may function analogously to oars in a rowboat. The myxobacteria have proved to be a rich source of novel natural products. Sorangium cellulosum produces a number of antibacterial, antifungal and cytotoxic substances which are being studies for therapeutic applications.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010162:11908749119087491195333644588Sorangium cellulosum 'So ce 56', complete genome01084BLASTN svgBLASTP svg
NC_010162:78248787824878785192027043Sorangium cellulosum 'So ce 56', complete genome1e-1799.6BLASTN svgBLASTP svg
NC_019897:20952320952323439624874Thermobacillus composti KWC4 chromosome, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_008314:1465643*1465643151598150339Ralstonia eutropha H16 chromosome 2, complete sequence1e-1179.8BLASTN svgBLASTP svg
NC_019897:3810000*3810000386600956010Thermobacillus composti KWC4 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_006177:12546351254635128152926895Symbiobacterium thermophilum IAM 14863, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_021184:38411723841172387450633335Desulfotomaculum gibsoniae DSM 7213, complete genome7e-0763.9BLASTN svgBLASTP svg