Pre_GI: BLASTN Hits

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Query: NC_010162:7899980 Sorangium cellulosum 'So ce 56', complete genome

Start: 7899980, End: 7926524, Length: 26545

Host Lineage: Sorangium cellulosum; Sorangium; Polyangiaceae; Myxococcales; Proteobacteria; Bacteria

General Information: Sorangium cellulosum 'So ce 56' produces a large number of bioactive compounds, such as, the antifungal soraphen and the anticancer agent epothilone. This organism, like other myxobacteria, undergoes a complex development and differentiation pathway. When cell density increases, the organism switches to "social motility" where aggregates of cells can gather together into masses termed fruiting bodies that may consist of up to 100 000 cells. The motility system is not dependent on flagella like most bacteria, but instead relies on twitching pili: short extracellular appendages that may function analogously to oars in a rowboat. The myxobacteria have proved to be a rich source of novel natural products. Sorangium cellulosum produces a number of antibacterial, antifungal and cytotoxic substances which are being studies for therapeutic applications.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010162:65625716562571660252339953Sorangium cellulosum 'So ce 56', complete genome5e-45190BLASTN svgBLASTP svg
NC_014931:23364652336465236070324239Variovorax paradoxus EPS chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_009921:3098271*3098271316510166831Frankia sp. EAN1pec, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_009049:2131017*2131017216459933583Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequence8e-1073.8BLASTN svgBLASTP svg
NC_003112:15940001594000161392219923Neisseria meningitidis MC58, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_008826:17060917060919782727219Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence3e-0971.9BLASTN svgBLASTP svg
NC_011894:57879905787990583359945610Methylobacterium nodulans ORS 2060, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015588:1463628*1463628149116227535Isoptericola variabilis 225 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014666:80160668016066805302136956Frankia sp. EuI1c chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_015757:158014*15801418132923316Sulfobacillus acidophilus TPY chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg