Query: NC_010162:7899980 Sorangium cellulosum 'So ce 56', complete genome
Start: 7899980, End: 7926524, Length: 26545
Host Lineage: Sorangium cellulosum; Sorangium; Polyangiaceae; Myxococcales; Proteobacteria; Bacteria
General Information: Sorangium cellulosum 'So ce 56' produces a large number of bioactive compounds, such as, the antifungal soraphen and the anticancer agent epothilone. This organism, like other myxobacteria, undergoes a complex development and differentiation pathway. When cell density increases, the organism switches to "social motility" where aggregates of cells can gather together into masses termed fruiting bodies that may consist of up to 100 000 cells. The motility system is not dependent on flagella like most bacteria, but instead relies on twitching pili: short extracellular appendages that may function analogously to oars in a rowboat. The myxobacteria have proved to be a rich source of novel natural products. Sorangium cellulosum produces a number of antibacterial, antifungal and cytotoxic substances which are being studies for therapeutic applications.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_010162:6562571 | 6562571 | 6602523 | 39953 | Sorangium cellulosum 'So ce 56', complete genome | 5e-45 | 190 | BLASTN svg | BLASTP svg |
| NC_014931:2336465 | 2336465 | 2360703 | 24239 | Variovorax paradoxus EPS chromosome, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_009921:3098271* | 3098271 | 3165101 | 66831 | Frankia sp. EAN1pec, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_009049:2131017* | 2131017 | 2164599 | 33583 | Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequence | 8e-10 | 73.8 | BLASTN svg | BLASTP svg |
| NC_003112:1594000 | 1594000 | 1613922 | 19923 | Neisseria meningitidis MC58, complete genome | 8e-10 | 73.8 | BLASTN svg | BLASTP svg |
| NC_008826:170609 | 170609 | 197827 | 27219 | Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_011894:5787990 | 5787990 | 5833599 | 45610 | Methylobacterium nodulans ORS 2060, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_015588:1463628* | 1463628 | 1491162 | 27535 | Isoptericola variabilis 225 chromosome, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_014666:8016066 | 8016066 | 8053021 | 36956 | Frankia sp. EuI1c chromosome, complete genome | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_015757:158014* | 158014 | 181329 | 23316 | Sulfobacillus acidophilus TPY chromosome, complete genome | 8e-07 | 63.9 | BLASTN svg | BLASTP svg |