Pre_GI: BLASTN Hits

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Query: NC_010067:3247169 Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete

Start: 3247169, End: 3272630, Length: 25462

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This subspecies (IIIa) is usually found associated with reptiles, although contact with infected animals can result in the spread of the organism to humans or animals such as turkeys. This strain was originally isolated from a cornsnake in 1986 in Oregon, USA. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
CP002797:4411763*4411763444042528663Escherichia coli NA114, complete genome01251BLASTN svgBLASTP svg
NC_009778:19029951902995192149318499Enterobacter sakazakii ATCC BAA-894, complete genome0850BLASTN svgBLASTP svg
NC_012779:2281700*2281700230559923900Edwardsiella ictaluri 93-146, complete genome3e-145523BLASTN svgBLASTP svg
NC_012214:2221702*2221702227363551934Erwinia pyrifoliae Ep1/96, complete genome6e-134486BLASTN svgBLASTP svg
NC_010694:21380002138000218529147292Erwinia tasmaniensis, complete genome6e-134486BLASTN svgBLASTP svg
NC_013421:1954915*1954915197410019186Pectobacterium wasabiae WPP163, complete genome7e-115422BLASTN svgBLASTP svg
NC_021066:3703725*3703725372609922375Raoultella ornithinolytica B6, complete genome1e-97365BLASTN svgBLASTP svg
NC_012779:21275422127542216530837767Edwardsiella ictaluri 93-146, complete genome3e-40174BLASTN svgBLASTP svg
NC_012779:3176820*3176820323178054961Edwardsiella ictaluri 93-146, complete genome1e-39172BLASTN svgBLASTP svg
NC_012779:20645822064582209112726546Edwardsiella ictaluri 93-146, complete genome1e-39172BLASTN svgBLASTP svg
NC_012779:1449500*1449500150683157332Edwardsiella ictaluri 93-146, complete genome1e-39172BLASTN svgBLASTP svg
NC_012779:26198712619871264372223852Edwardsiella ictaluri 93-146, complete genome5e-39170BLASTN svgBLASTP svg
NC_009832:42698044269804429650026697Serratia proteamaculans 568, complete genome2e-35159BLASTN svgBLASTP svg
NC_013961:1622616*1622616167386551250Erwinia amylovora, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_012779:30596930596933285826890Edwardsiella ictaluri 93-146, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_012779:95755895755898306025503Edwardsiella ictaluri 93-146, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_010998:11105211105213523024179Rhizobium etli CIAT 652 plasmid pA, complete sequence8e-1073.8BLASTN svgBLASTP svg
NC_009778:259241*25924128824029000Enterobacter sakazakii ATCC BAA-894, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_013855:964000*96400098966925670Azospirillum sp. B510 plasmid pAB510a, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_015566:2039431*2039431206952030090Serratia sp. AS12 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_020260:263528*26352829118227655Cronobacter sakazakii Sp291, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_020211:21238192123819214659922781Serratia marcescens WW4, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013282:3719500*3719500373815318654Cronobacter turicensis, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011565:620801*62080165959938799Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,2e-0765.9BLASTN svgBLASTP svg