Query: NC_010067:3247169 Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete
Start: 3247169, End: 3272630, Length: 25462
Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria
General Information: This subspecies (IIIa) is usually found associated with reptiles, although contact with infected animals can result in the spread of the organism to humans or animals such as turkeys. This strain was originally isolated from a cornsnake in 1986 in Oregon, USA. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| CP002797:4411763* | 4411763 | 4440425 | 28663 | Escherichia coli NA114, complete genome | 0 | 1251 | BLASTN svg | BLASTP svg |
| NC_009778:1902995 | 1902995 | 1921493 | 18499 | Enterobacter sakazakii ATCC BAA-894, complete genome | 0 | 850 | BLASTN svg | BLASTP svg |
| NC_012779:2281700* | 2281700 | 2305599 | 23900 | Edwardsiella ictaluri 93-146, complete genome | 3e-145 | 523 | BLASTN svg | BLASTP svg |
| NC_012214:2221702* | 2221702 | 2273635 | 51934 | Erwinia pyrifoliae Ep1/96, complete genome | 6e-134 | 486 | BLASTN svg | BLASTP svg |
| NC_010694:2138000 | 2138000 | 2185291 | 47292 | Erwinia tasmaniensis, complete genome | 6e-134 | 486 | BLASTN svg | BLASTP svg |
| NC_013421:1954915* | 1954915 | 1974100 | 19186 | Pectobacterium wasabiae WPP163, complete genome | 7e-115 | 422 | BLASTN svg | BLASTP svg |
| NC_021066:3703725* | 3703725 | 3726099 | 22375 | Raoultella ornithinolytica B6, complete genome | 1e-97 | 365 | BLASTN svg | BLASTP svg |
| NC_012779:2127542 | 2127542 | 2165308 | 37767 | Edwardsiella ictaluri 93-146, complete genome | 3e-40 | 174 | BLASTN svg | BLASTP svg |
| NC_012779:3176820* | 3176820 | 3231780 | 54961 | Edwardsiella ictaluri 93-146, complete genome | 1e-39 | 172 | BLASTN svg | BLASTP svg |
| NC_012779:2064582 | 2064582 | 2091127 | 26546 | Edwardsiella ictaluri 93-146, complete genome | 1e-39 | 172 | BLASTN svg | BLASTP svg |
| NC_012779:1449500* | 1449500 | 1506831 | 57332 | Edwardsiella ictaluri 93-146, complete genome | 1e-39 | 172 | BLASTN svg | BLASTP svg |
| NC_012779:2619871 | 2619871 | 2643722 | 23852 | Edwardsiella ictaluri 93-146, complete genome | 5e-39 | 170 | BLASTN svg | BLASTP svg |
| NC_009832:4269804 | 4269804 | 4296500 | 26697 | Serratia proteamaculans 568, complete genome | 2e-35 | 159 | BLASTN svg | BLASTP svg |
| NC_013961:1622616* | 1622616 | 1673865 | 51250 | Erwinia amylovora, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
| NC_012779:305969 | 305969 | 332858 | 26890 | Edwardsiella ictaluri 93-146, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_012779:957558 | 957558 | 983060 | 25503 | Edwardsiella ictaluri 93-146, complete genome | 8e-10 | 73.8 | BLASTN svg | BLASTP svg |
| NC_010998:111052 | 111052 | 135230 | 24179 | Rhizobium etli CIAT 652 plasmid pA, complete sequence | 8e-10 | 73.8 | BLASTN svg | BLASTP svg |
| NC_009778:259241* | 259241 | 288240 | 29000 | Enterobacter sakazakii ATCC BAA-894, complete genome | 8e-10 | 73.8 | BLASTN svg | BLASTP svg |
| NC_013855:964000* | 964000 | 989669 | 25670 | Azospirillum sp. B510 plasmid pAB510a, complete sequence | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_015566:2039431* | 2039431 | 2069520 | 30090 | Serratia sp. AS12 chromosome, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_020260:263528* | 263528 | 291182 | 27655 | Cronobacter sakazakii Sp291, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_020211:2123819 | 2123819 | 2146599 | 22781 | Serratia marcescens WW4, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_013282:3719500* | 3719500 | 3738153 | 18654 | Cronobacter turicensis, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_011565:620801* | 620801 | 659599 | 38799 | Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2, | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |