Pre_GI: BLASTN Hits

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Query: NC_010001:615427 Clostridium phytofermentans ISDg, complete genome

Start: 615427, End: 638291, Length: 22865

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015391:24499272449927246920719281Carnobacterium sp. 17-4 chromosome, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_006347:70607*706079921628610Bacteroides fragilis YCH46, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_003228:761407614010225526116Bacteroides fragilis NCTC 9343, complete genome1e-1489.7BLASTN svgBLASTP svg