Pre_GI: BLASTN Hits

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Query: NC_009953:1831000 Salinispora arenicola CNS-205 chromosome, complete genome

Start: 1831000, End: 1848599, Length: 17600

Host Lineage: Salinispora arenicola; Salinispora; Micromonosporaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Found in marine sediment, this organism produces cancer-fighting compounds. Salinispora strains are commonly isolated from tropical marine sediment. Members of this genus produce branched hyphae and require media which contain seawater or sodium. A survey of the cultured species identified over 90 isolates which produce compounds that inhibited cancer cells. These organisms may be a new source of bioactive chemicals for use in disease and cancer treatments. Salinispora arenicola produces the bioactive compounds staurosporine and rifamycin which may be useful in the treatment of cancer.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_013595:5176000*5176000519869322694Streptosporangium roseum DSM 43021, complete genome1e-1385.7BLASTN svgBLASTP svg
NC_013757:20460002046000206434218343Geodermatophilus obscurus DSM 43160, complete genome5e-1073.8BLASTN svgBLASTP svg
NC_018750:13900291390029140825618228Streptomyces venezuelae ATCC 10712, complete genome5e-0763.9BLASTN svgBLASTP svg
NC_012669:969669696612177224807Beutenbergia cavernae DSM 12333, complete genome8e-0660BLASTN svgBLASTP svg