Pre_GI: BLASTN Hits

Some Help

Query: NC_009792:3225965 Citrobacter koseri ATCC BAA-895, complete genome

Start: 3225965, End: 3244317, Length: 18353

Host Lineage: Citrobacter koseri; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter koseri ATCC BAA-895 is a clinical isolate from a human infant. Causative agent of neonatal meningitis. Citrobacter koseri, previously known as Citrobacter diversus, Levinea diversus or Levinea malonatica resides in a wide range of environments, including soil, water and food products. It is an occasional inhabitant of human and animal intestines, but is mainly characterized as being a causative agent of neonatal meningitis with an extreme high rate of multiple brain abscess initiations and a concomitant high moratility rate. The bacteria are used in neonatal rat models to study the mechanism of blood-brain barrier penetration, host immune response evasion and its resistance to phagocytotic killing.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010102:4745949*4745949476837922431Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,011190BLASTN svgBLASTP svg
NC_011750:47757704775770480021124442Escherichia coli IAI39 chromosome, complete genome05305BLASTN svgBLASTP svg
NC_008253:47354184735418477925943842Escherichia coli 536, complete genome05225BLASTN svgBLASTP svg
NC_007384:33839833383983340296018978Shigella sonnei Ss046, complete genome05214BLASTN svgBLASTP svg
NC_004741:3041294*3041294310468963396Shigella flexneri 2a str. 2457T, complete genome05214BLASTN svgBLASTP svg
NC_004337:3049118*3049118311609966982Shigella flexneri 2a str. 301, complete genome05214BLASTN svgBLASTP svg
CU928145:4792703*4792703481092818226Escherichia coli 55989 chromosome, complete genome05206BLASTN svgBLASTP svg
NC_011748:4792703*4792703481092818226Escherichia coli 55989, complete genome05206BLASTN svgBLASTP svg
NC_007946:47797454779745482809648352Escherichia coli UTI89, complete genome05190BLASTN svgBLASTP svg
NC_009648:5119271*5119271515776838498Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome04653BLASTN svgBLASTP svg
NC_004431:4955658*4955658497950623849Escherichia coli CFT073, complete genome02728BLASTN svgBLASTP svg
NC_011149:46774124677412471244835037Salmonella enterica subsp. enterica serovar Agona str. SL483,01491BLASTN svgBLASTP svg
NC_004337:3590323*35903233952993362671Shigella flexneri 2a str. 301, complete genome0716BLASTN svgBLASTP svg
NC_015968:511282*51128254179030509Enterobacter asburiae LF7a chromosome, complete genome3e-116426BLASTN svgBLASTP svg
NC_014121:677799*67779969989822100Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete2e-114420BLASTN svgBLASTP svg
NC_020063:4127161*4127161415360026440Enterobacteriaceae bacterium strain FGI 57, complete genome5e-78299BLASTN svgBLASTP svg
NC_006905:4638707*4638707467273934033Salmonella enterica subsp. enterica serovar Choleraesuis str5e-72280BLASTN svgBLASTP svg
NC_004631:4687270*4687270471022622957Salmonella enterica subsp. enterica serovar Typhi Ty2, complete2e-68268BLASTN svgBLASTP svg
NC_012779:1449500*1449500150683157332Edwardsiella ictaluri 93-146, complete genome2e-49204BLASTN svgBLASTP svg
NC_007606:4182188*4182188420162219435Shigella dysenteriae Sd197, complete genome2e-43184BLASTN svgBLASTP svg
NC_015224:61080761080762877617970Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,1e-23119BLASTN svgBLASTP svg
NC_009832:622969*62296965041627448Serratia proteamaculans 568, complete genome2e-19105BLASTN svgBLASTP svg
NC_014228:35343783534378355604421667Xenorhabdus nematophila ATCC 19061, complete genome3e-18101BLASTN svgBLASTP svg
NC_012214:33039553303955332359919645Erwinia pyrifoliae Ep1/96, complete genome6e-1693.7BLASTN svgBLASTP svg
NC_014562:1883517*1883517190910525589Pantoea vagans C9-1 chromosome, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_011750:2928990*2928990296940040411Escherichia coli IAI39 chromosome, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_005126:34965834965840029550638Photorhabdus luminescens subsp. laumondii TTO1, complete genome9e-1279.8BLASTN svgBLASTP svg
CP002797:46563274656327468071624390Escherichia coli NA114, complete genome6e-1073.8BLASTN svgBLASTP svg
AC_000091:45349354534935455904124107Escherichia coli W3110 DNA, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_000913:45282784528278455238424107Escherichia coli K12, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_010473:46303614630361465014819788Escherichia coli str. K-12 substr. DH10B, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_011751:50705975070597508906918473Escherichia coli UMN026 chromosome, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_015663:4906652*4906652493024623595Enterobacter aerogenes KCTC 2190 chromosome, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_021066:601029*60102962413023102Raoultella ornithinolytica B6, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_002655:27306592730659276187131213Escherichia coli O157:H7 EDL933, complete genome5e-0763.9BLASTN svgBLASTP svg
NC_000913:2028472*2028472205003821567Escherichia coli K12, complete genome5e-0763.9BLASTN svgBLASTP svg
CU928160:2091249*2091249211444123193Escherichia coli IAI1 chromosome, complete genome5e-0763.9BLASTN svgBLASTP svg
CP002516:1902431*1902431192618823758Escherichia coli KO11, complete genome5e-0763.9BLASTN svgBLASTP svg
CP002185:2181936*2181936220473822803Escherichia coli W, complete genome5e-0763.9BLASTN svgBLASTP svg
AC_000091:2027648*2027648207009942452Escherichia coli W3110 DNA, complete genome5e-0763.9BLASTN svgBLASTP svg
NC_002695:26554452655445267786922425Escherichia coli O157:H7 str. Sakai, complete genome5e-0763.9BLASTN svgBLASTP svg
NC_004547:91355391355395334239790Erwinia carotovora subsp. atroseptica SCRI1043, complete genome5e-0763.9BLASTN svgBLASTP svg
NC_008060:1544920*1544920156855223633Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence5e-0763.9BLASTN svgBLASTP svg
NC_008544:615448*61544864197226525Burkholderia cenocepacia HI2424 chromosome 3, complete sequence5e-0763.9BLASTN svgBLASTP svg
NC_009800:20493462049346207518725842Escherichia coli HS, complete genome5e-0763.9BLASTN svgBLASTP svg
NC_009801:21591232159123218213823016Escherichia coli E24377A, complete genome5e-0763.9BLASTN svgBLASTP svg
NC_010473:2119480*2119480215635336874Escherichia coli str. K-12 substr. DH10B, complete genome5e-0763.9BLASTN svgBLASTP svg
NC_010498:12101451210145123409923955Escherichia coli SMS-3-5, complete genome5e-0763.9BLASTN svgBLASTP svg
NC_010512:1196616*1196616122450027885Burkholderia cenocepacia MC0-3 chromosome 3, complete sequence5e-0763.9BLASTN svgBLASTP svg
NC_012917:83372183372187179538075Pectobacterium carotovorum subsp. carotovorum PC1, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_006513:1379735*1379735146218482450Azoarcus sp. EbN1, complete genome2e-0661.9BLASTN svgBLASTP svg