Pre_GI: BLASTN Hits

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Query: NC_009698:3275839 Clostridium botulinum A str. Hall chromosome, complete genome

Start: 3275839, End: 3294938, Length: 19100

Host Lineage: Clostridium botulinum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium botulinum A strain Hall was received at Fort Detrick from Harvard University in 1947. The strain is presumably one from Dr. Ivan Hall's collection, but the exact strain number has been lost. This strain produces high amounts of type A toxin. Produces botulinum, one of the most potent toxins known. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This organism produces one of the most potent and deadly neurotoxins known, a botulinum toxin that prevents the release of acetylcholine at the neuromuscular junction, thereby inhibiting muscle contraction and causing paralysis. In most cases the diseased person dies of asphyxiation as a result of paralysis of chest muscles involved in breathing. The spores are heat-resistant and can survive in inadequately heated, prepared, or processed foods. Spores germinate under favorable conditions (anaerobiosis and substrate-rich environment) and bacteria start propagating very rapidly, producing the toxin. Botulinum toxin, and C. botulinum cells, has been found in a wide variety of foods, including canned ones. Almost any food that has a high pH (above 4.6) can support growth of the bacterium.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010516:34660003466000348809922100Clostridium botulinum B1 str. Okra, complete genome04080BLASTN svgBLASTP svg
NC_010723:485874*48587450809922226Clostridium botulinum E3 str. Alaska E43, complete genome2e-80307BLASTN svgBLASTP svg
NC_014393:36509573650957366964218686Clostridium cellulovorans 743B chromosome, complete genome5e-69270BLASTN svgBLASTP svg
NC_003366:24949072494907251858823682Clostridium perfringens str. 13, complete genome2e-65258BLASTN svgBLASTP svg
NC_008261:2708929*2708929273260323675Clostridium perfringens ATCC 13124, complete genome2e-65258BLASTN svgBLASTP svg
NC_021182:14735351473535149659923065Clostridium pasteurianum BC1, complete genome2e-65258BLASTN svgBLASTP svg
NC_004557:25524182552418257431921902Clostridium tetani E88, complete genome3e-64254BLASTN svgBLASTP svg
NC_008262:2379144*2379144239845819315Clostridium perfringens SM101, complete genome2e-62248BLASTN svgBLASTP svg
NC_020291:684500*68450070271718218Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome6e-53216BLASTN svgBLASTP svg
NC_008262:24980002498000252144223443Clostridium perfringens SM101, complete genome2e-50208BLASTN svgBLASTP svg
NC_008593:15131071513107153682423718Clostridium novyi NT, complete genome1e-44188BLASTN svgBLASTP svg
NC_020291:22914182291418231430022883Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome2e-43184BLASTN svgBLASTP svg
NC_008262:17214961721496174021318718Clostridium perfringens SM101, complete genome3e-39170BLASTN svgBLASTP svg
NC_008593:22818962281896230590024005Clostridium novyi NT, complete genome3e-33151BLASTN svgBLASTP svg
NC_010723:37174137174139352221782Clostridium botulinum E3 str. Alaska E43, complete genome8e-31143BLASTN svgBLASTP svg
NC_010674:37062937062939810727479Clostridium botulinum B str. Eklund 17B, complete genome8e-31143BLASTN svgBLASTP svg
NC_020291:49100049100051106420065Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome1e-29139BLASTN svgBLASTP svg
NC_020291:24875752487575251068823114Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome2e-19105BLASTN svgBLASTP svg
NC_021182:40880004088000411160223603Clostridium pasteurianum BC1, complete genome3e-18101BLASTN svgBLASTP svg
NC_014330:1113145*1113145114959936455Brachyspira pilosicoli 95/1000 chromosome, complete genome4e-1797.6BLASTN svgBLASTP svg
NC_018607:290500*29050033195841459Brachyspira pilosicoli B2904 chromosome, complete genome4e-1797.6BLASTN svgBLASTP svg
NC_018604:2579000*2579000263363754638Brachyspira pilosicoli WesB complete genome4e-1797.6BLASTN svgBLASTP svg
NC_019908:2068631*2068631210767339043Brachyspira pilosicoli P43/6/78 chromosome, complete genome4e-1797.6BLASTN svgBLASTP svg
NC_012225:21989872198987222132922343Brachyspira hyodysenteriae WA1, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_012563:37298173729817376659036774Clostridium botulinum A2 str. Kyoto, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_010718:1959517*1959517198298623470Natranaerobius thermophilus JW/NM-WN-LF, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_010674:65859665859667712118526Clostridium botulinum B str. Eklund 17B, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_010516:35450173545017356809923083Clostridium botulinum B1 str. Okra, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_009089:96595996595998833722379Clostridium difficile 630, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_020291:42465004246500427194125442Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome2e-1385.7BLASTN svgBLASTP svg
NC_021182:93000*9300014465551656Clostridium pasteurianum BC1, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_020291:39000463900046392536225317Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome2e-1281.8BLASTN svgBLASTP svg
NC_010723:62292862292864247719550Clostridium botulinum E3 str. Alaska E43, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_016012:236012*23601227777541764Candidatus Arthromitus sp. SFB-rat-Yit, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_013316:89178289178291434722566Clostridium difficile R20291, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_003909:4996783*4996783505271855936Bacillus cereus ATCC 10987, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_003997:5032969*5032969507209939131Bacillus anthracis str. Ames, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_005945:5053000*5053000507465121652Bacillus anthracis str. Sterne, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_006274:5122500*5122500514359021091Bacillus cereus E33L, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_007530:5033095*5033095507221139117Bacillus anthracis str. 'Ames Ancestor', complete genome1e-1075.8BLASTN svgBLASTP svg
NC_014393:30556103055610307809922490Clostridium cellulovorans 743B chromosome, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_020291:59810065981006600872727722Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome1e-1075.8BLASTN svgBLASTP svg
NC_014614:47857847857849868920112Clostridium sticklandii, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_013316:29680002968000299190223903Clostridium difficile R20291, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_009922:41143441143444552934096Alkaliphilus oremlandii OhILAs, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_007907:46923364692336471361021275Desulfitobacterium hafniense Y51, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_003030:1037885*1037885106609928215Clostridium acetobutylicum ATCC 824, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_011898:3159411*3159411320519745787Clostridium cellulolyticum H10, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015687:1037706*1037706106791230207Clostridium acetobutylicum DSM 1731 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_020291:62740306274030629482420795Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome1e-0765.9BLASTN svgBLASTP svg
NC_012225:19016561901656192114319488Brachyspira hyodysenteriae WA1, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_010334:15616911561691159069529005Shewanella halifaxensis HAW-EB4, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_003869:1643682*1643682167230228621Thermoanaerobacter tengcongensis MB4, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_003366:12878312878314709918317Clostridium perfringens str. 13, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_003366:72885972885975493526077Clostridium perfringens str. 13, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_008261:676000*67600070224526246Clostridium perfringens ATCC 13124, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_008262:654000*65400067859924600Clostridium perfringens SM101, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_014328:23269302326930235084023911Clostridium ljungdahlii ATCC 49587 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_014377:1227850*1227850127023442385Thermosediminibacter oceani DSM 16646 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_015275:88202288202290126519244Clostridium lentocellum DSM 5427 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_012563:24660002466000248852922530Clostridium botulinum A2 str. Kyoto, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_014330:697429*69742972243325005Brachyspira pilosicoli 95/1000 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_015687:14786681478668150267124004Clostridium acetobutylicum DSM 1731 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_019908:2496149*2496149252410127953Brachyspira pilosicoli P43/6/78 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_003030:38716583871658389490323246Clostridium acetobutylicum ATCC 824, complete genome9e-0660BLASTN svgBLASTP svg
NC_014330:76823276823281309944868Brachyspira pilosicoli 95/1000 chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_015687:27964127964130219622556Clostridium acetobutylicum DSM 1731 chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_018607:21115812111581214532233742Brachyspira pilosicoli B2904 chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_019908:24015772401577244617744601Brachyspira pilosicoli P43/6/78 chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_021171:44250504425050444858523536Bacillus sp. 1NLA3E, complete genome9e-0660BLASTN svgBLASTP svg
NC_003030:27964327964330219822556Clostridium acetobutylicum ATCC 824, complete genome9e-0660BLASTN svgBLASTP svg