Pre_GI: BLASTN Hits

Some Help

Query: NC_009698:3046833 Clostridium botulinum A str. Hall chromosome, complete genome

Start: 3046833, End: 3066179, Length: 19347

Host Lineage: Clostridium botulinum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium botulinum A strain Hall was received at Fort Detrick from Harvard University in 1947. The strain is presumably one from Dr. Ivan Hall's collection, but the exact strain number has been lost. This strain produces high amounts of type A toxin. Produces botulinum, one of the most potent toxins known. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This organism produces one of the most potent and deadly neurotoxins known, a botulinum toxin that prevents the release of acetylcholine at the neuromuscular junction, thereby inhibiting muscle contraction and causing paralysis. In most cases the diseased person dies of asphyxiation as a result of paralysis of chest muscles involved in breathing. The spores are heat-resistant and can survive in inadequately heated, prepared, or processed foods. Spores germinate under favorable conditions (anaerobiosis and substrate-rich environment) and bacteria start propagating very rapidly, producing the toxin. Botulinum toxin, and C. botulinum cells, has been found in a wide variety of foods, including canned ones. Almost any food that has a high pH (above 4.6) can support growth of the bacterium.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_012563:3416509*3416509343524718739Clostridium botulinum A2 str. Kyoto, complete genome04337BLASTN svgBLASTP svg
NC_010516:3234791*3234791325832823538Clostridium botulinum B1 str. Okra, complete genome04337BLASTN svgBLASTP svg
NC_014328:794000*79400081614922150Clostridium ljungdahlii ATCC 49587 chromosome, complete genome2e-68268BLASTN svgBLASTP svg
NC_010520:3204480*3204480322378019301Clostridium botulinum A3 str. Loch Maree, complete genome1e-29139BLASTN svgBLASTP svg
NC_010516:3196158*3196158321545819301Clostridium botulinum B1 str. Okra, complete genome3e-27131BLASTN svgBLASTP svg
NC_021182:2160580*2160580218559925020Clostridium pasteurianum BC1, complete genome3e-24121BLASTN svgBLASTP svg
NC_020291:57520995752099577709925001Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome4e-23117BLASTN svgBLASTP svg
NC_010516:3845942*3845942386860822667Clostridium botulinum B1 str. Okra, complete genome1e-20109BLASTN svgBLASTP svg
NC_012563:3580000*3580000360253222533Clostridium botulinum A2 str. Kyoto, complete genome4e-20107BLASTN svgBLASTP svg
NC_016012:396910*39691041471617807Candidatus Arthromitus sp. SFB-rat-Yit, complete genome3e-18101BLASTN svgBLASTP svg
NC_012563:2230403*2230403225235521953Clostridium botulinum A2 str. Kyoto, complete genome4e-1797.6BLASTN svgBLASTP svg
NC_010520:72531272531274947124160Clostridium botulinum A3 str. Loch Maree, complete genome4e-1797.6BLASTN svgBLASTP svg
NC_012563:32881243288124330917721054Clostridium botulinum A2 str. Kyoto, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_003030:13757641375764139779422031Clostridium acetobutylicum ATCC 824, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_015687:13773671377367140027722911Clostridium acetobutylicum DSM 1731 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_010520:11460001146000116884922850Clostridium botulinum A3 str. Loch Maree, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_021182:37715233771523379409922577Clostridium pasteurianum BC1, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_010516:20640272064027208498120955Clostridium botulinum B1 str. Okra, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_020291:57789995778999580315424156Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome9e-0969.9BLASTN svgBLASTP svg
NC_014328:34829803482980351005727078Clostridium ljungdahlii ATCC 49587 chromosome, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_018515:4196409*4196409423259936191Desulfosporosinus meridiei DSM 13257 chromosome, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_021182:12456921245692126370418013Clostridium pasteurianum BC1, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_012563:122000*12200014417822179Clostridium botulinum A2 str. Kyoto, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_010520:15860001586000160832222323Clostridium botulinum A3 str. Loch Maree, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_010516:127000*12700015115624157Clostridium botulinum B1 str. Okra, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_014328:85290*8529014387558586Clostridium ljungdahlii ATCC 49587 chromosome, complete genome9e-0660BLASTN svgBLASTP svg