Pre_GI: BLASTN Hits

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Query: NC_009698:2420484 Clostridium botulinum A str. Hall chromosome, complete genome

Start: 2420484, End: 2438099, Length: 17616

Host Lineage: Clostridium botulinum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium botulinum A strain Hall was received at Fort Detrick from Harvard University in 1947. The strain is presumably one from Dr. Ivan Hall's collection, but the exact strain number has been lost. This strain produces high amounts of type A toxin. Produces botulinum, one of the most potent toxins known. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This organism produces one of the most potent and deadly neurotoxins known, a botulinum toxin that prevents the release of acetylcholine at the neuromuscular junction, thereby inhibiting muscle contraction and causing paralysis. In most cases the diseased person dies of asphyxiation as a result of paralysis of chest muscles involved in breathing. The spores are heat-resistant and can survive in inadequately heated, prepared, or processed foods. Spores germinate under favorable conditions (anaerobiosis and substrate-rich environment) and bacteria start propagating very rapidly, producing the toxin. Botulinum toxin, and C. botulinum cells, has been found in a wide variety of foods, including canned ones. Almost any food that has a high pH (above 4.6) can support growth of the bacterium.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_012563:2761570*2761570280230240733Clostridium botulinum A2 str. Kyoto, complete genome03745BLASTN svgBLASTP svg
NC_010516:2567911*2567911258780819898Clostridium botulinum B1 str. Okra, complete genome03713BLASTN svgBLASTP svg
NC_010520:2635750*2635750265654120792Clostridium botulinum A3 str. Loch Maree, complete genome03495BLASTN svgBLASTP svg
NC_014328:1379437*1379437140209922663Clostridium ljungdahlii ATCC 49587 chromosome, complete genome5e-47196BLASTN svgBLASTP svg
NC_020291:1437431*1437431145705319623Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome5e-44186BLASTN svgBLASTP svg
NC_010516:3845942*3845942386860822667Clostridium botulinum B1 str. Okra, complete genome4e-20107BLASTN svgBLASTP svg
NC_018664:1699618*1699618171859918982Clostridium acidurici 9a chromosome, complete genome2e-19105BLASTN svgBLASTP svg
NC_013316:1225797*1225797124983024034Clostridium difficile R20291, complete genome1e-1695.6BLASTN svgBLASTP svg
NC_014964:1309845*1309845133261422770Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, complete2e-1281.8BLASTN svgBLASTP svg
NC_012563:2230403*2230403225235521953Clostridium botulinum A2 str. Kyoto, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_010520:28074292807429283431926891Clostridium botulinum A3 str. Loch Maree, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_010516:27772052777205280241925215Clostridium botulinum B1 str. Okra, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_010520:14279811427981145070222722Clostridium botulinum A3 str. Loch Maree, complete genome5e-1073.8BLASTN svgBLASTP svg
NC_014448:487381*48738151116023780Mycoplasma hyorhinis HUB-1 chromosome, complete genome8e-0969.9BLASTN svgBLASTP svg
NC_015958:1422319*1422319144310120783Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genome8e-0969.9BLASTN svgBLASTP svg
NC_019978:1410041*1410041143133721297Halobacteroides halobius DSM 5150, complete genome3e-0867.9BLASTN svgBLASTP svg
NC_013893:17239391723939174613522197Staphylococcus lugdunensis HKU09-01 chromosome, complete genome3e-0867.9BLASTN svgBLASTP svg
NC_010516:3196158*3196158321545819301Clostridium botulinum B1 str. Okra, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_012563:24660002466000248852922530Clostridium botulinum A2 str. Kyoto, complete genome5e-0763.9BLASTN svgBLASTP svg
NC_003366:25548025548029721641737Clostridium perfringens str. 13, complete genome5e-0763.9BLASTN svgBLASTP svg
NC_020164:1590221*1590221161409923879Staphylococcus warneri SG1, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_021182:11880001188000121083922840Clostridium pasteurianum BC1, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_013517:2633574*2633574265613222559Sebaldella termitidis ATCC 33386, complete genome8e-0660BLASTN svgBLASTP svg
NC_013515:65822658228859522774Streptobacillus moniliformis DSM 12112, complete genome8e-0660BLASTN svgBLASTP svg
NC_010520:11460001146000116884922850Clostridium botulinum A3 str. Loch Maree, complete genome8e-0660BLASTN svgBLASTP svg
NC_008262:227354*22735427081243459Clostridium perfringens SM101, complete genome8e-0660BLASTN svgBLASTP svg