Pre_GI: BLASTN Hits

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Query: NC_009664:4225325 Kineococcus radiotolerans SRS30216, complete genome

Start: 4225325, End: 4245253, Length: 19929

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009664:4423829*44238294686013262185Kineococcus radiotolerans SRS30216, complete genome01637BLASTN svgBLASTP svg
NC_005085:27743702774370280244228073Chromobacterium violaceum ATCC 12472, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_009664:4696961*4696961475841661456Kineococcus radiotolerans SRS30216, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_013235:58496595849659587489725239Nakamurella multipartita DSM 44233, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008702:2039462*2039462206354724086Azoarcus sp. BH72, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015161:35400035400037631322314Deinococcus proteolyticus MRP chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_014815:44914134491413451775626344Micromonospora sp. L5 chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_013889:1514799*1514799153542720629Thioalkalivibrio sp. K90mix chromosome, complete genome9e-0660BLASTN svgBLASTP svg