Pre_GI: BLASTN Hits

Some Help

Query: NC_009495:2479465 Clostridium botulinum A str. ATCC 3502 chromosome, complete genome

Start: 2479465, End: 2523003, Length: 43539

Host Lineage: Clostridium botulinum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well-studied Hall strain that produces type A toxin. Produces botulinum, one of the most potent toxins known. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism produces one of the most potent and deadly neurotoxins known, a botulinum toxin that prevents the release of acetylcholine at the neuromuscular junction, thereby inhibiting muscle contraction and causing paralysis. In most cases the diseased person dies of asphyxiation as a result of paralysis of chest muscles involved in breathing. The spores are heat-resistant and can survive in inadequately heated, prepared, or processed foods. Spores germinate under favorable conditions (anaerobiosis and substrate-rich environment) and bacteria start propagating very rapidly, producing the toxin. Botulinum toxin, and C. botulinum cells, has been found in a wide variety of foods, including canned ones. Almost any food that has a high pH (above 4.6) can support growth of the bacterium.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_012563:25665002566500258437417875Clostridium botulinum A2 str. Kyoto, complete genome04304BLASTN svgBLASTP svg
NC_012563:25979342597934261595118018Clostridium botulinum A2 str. Kyoto, complete genome02070BLASTN svgBLASTP svg
NC_010516:23051102305110232828423175Clostridium botulinum B1 str. Okra, complete genome01340BLASTN svgBLASTP svg
NC_010516:2676746*2676746271365836913Clostridium botulinum B1 str. Okra, complete genome6e-61244BLASTN svgBLASTP svg
NC_004557:11415581141558115965918102Clostridium tetani E88, complete genome2e-51212BLASTN svgBLASTP svg
NC_014328:34344783434478345543420957Clostridium ljungdahlii ATCC 49587 chromosome, complete genome4e-19105BLASTN svgBLASTP svg
NC_010418:70000700009209922100Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete3e-0765.9BLASTN svgBLASTP svg
NC_009785:387910*38791041009922190Streptococcus gordonii str. Challis substr. CH1, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_010674:28176512817651283776520115Clostridium botulinum B str. Eklund 17B, complete genome5e-0661.9BLASTN svgBLASTP svg