Pre_GI: BLASTN Hits

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Query: NC_009495:1759759 Clostridium botulinum A str. ATCC 3502 chromosome, complete genome

Start: 1759759, End: 1782659, Length: 22901

Host Lineage: Clostridium botulinum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well-studied Hall strain that produces type A toxin. Produces botulinum, one of the most potent toxins known. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism produces one of the most potent and deadly neurotoxins known, a botulinum toxin that prevents the release of acetylcholine at the neuromuscular junction, thereby inhibiting muscle contraction and causing paralysis. In most cases the diseased person dies of asphyxiation as a result of paralysis of chest muscles involved in breathing. The spores are heat-resistant and can survive in inadequately heated, prepared, or processed foods. Spores germinate under favorable conditions (anaerobiosis and substrate-rich environment) and bacteria start propagating very rapidly, producing the toxin. Botulinum toxin, and C. botulinum cells, has been found in a wide variety of foods, including canned ones. Almost any food that has a high pH (above 4.6) can support growth of the bacterium.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008593:2020473*2020473204359923127Clostridium novyi NT, complete genome8e-22113BLASTN svgBLASTP svg
NC_014377:20337812033781205707323293Thermosediminibacter oceani DSM 16646 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014209:15804231580423160056920147Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,2e-1075.8BLASTN svgBLASTP svg
NC_004557:24750302475030249953624507Clostridium tetani E88, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014328:711842*71184273571723876Clostridium ljungdahlii ATCC 49587 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_010723:10143341014334103372419391Clostridium botulinum E3 str. Alaska E43, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014328:77309577309579175318659Clostridium ljungdahlii ATCC 49587 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015687:303810*30381036254358734Clostridium acetobutylicum DSM 1731 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_003030:303812*30381236254758736Clostridium acetobutylicum ATCC 824, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_020291:48158534815853483840422552Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome2e-0765.9BLASTN svgBLASTP svg
NC_021182:162236*16223618461322378Clostridium pasteurianum BC1, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014934:2482934*2482934250686923936Cellulophaga algicola DSM 14237 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg