Query: NC_009488:89844 Orientia tsutsugamushi str. Boryong, complete genome
Start: 89844, End: 114278, Length: 24435
Host Lineage: Orientia tsutsugamushi; Orientia; Rickettsiaceae; Rickettsiales; Proteobacteria; Bacteria
General Information: This strain was isolated from a human in 1995 in Boryong, Korea. Causal agent of scrub typhus. This organism is the causative agent of scrub typhus, and like other members of the Rickettsiales is an obligate intracellular organism. Scrub typhus, which occurs in rural and agricultural areas, is one of the most common infectious diseases in southeast Asia where an estimated 1 million cases occur each year. Many cases are mild, but if left untreated, a variety of serious illnesses can arise and fatality rates can range from 1-35%. Transmission occurs via an insect vector through the bite of the larval trombiculid mite (chiggers). The bacterium is transmitted transovarially in mites (from females to their offspring).
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_010793:1811401* | 1811401 | 1871543 | 60143 | Orientia tsutsugamushi str. Ikeda, complete genome | 0 | 6024 | BLASTN svg | BLASTP svg |
NC_010793:1508974 | 1508974 | 1532173 | 23200 | Orientia tsutsugamushi str. Ikeda, complete genome | 0 | 4133 | BLASTN svg | BLASTP svg |
NC_010793:496500 | 496500 | 515081 | 18582 | Orientia tsutsugamushi str. Ikeda, complete genome | 0 | 4066 | BLASTN svg | BLASTP svg |
NC_010793:416849 | 416849 | 440023 | 23175 | Orientia tsutsugamushi str. Ikeda, complete genome | 0 | 4066 | BLASTN svg | BLASTP svg |
NC_010793:1922000* | 1922000 | 1960581 | 38582 | Orientia tsutsugamushi str. Ikeda, complete genome | 0 | 3350 | BLASTN svg | BLASTP svg |
NC_010793:1628500* | 1628500 | 1648099 | 19600 | Orientia tsutsugamushi str. Ikeda, complete genome | 0 | 3148 | BLASTN svg | BLASTP svg |
NC_010793:1723365 | 1723365 | 1749396 | 26032 | Orientia tsutsugamushi str. Ikeda, complete genome | 0 | 3089 | BLASTN svg | BLASTP svg |
NC_010793:1158279 | 1158279 | 1176599 | 18321 | Orientia tsutsugamushi str. Ikeda, complete genome | 0 | 2995 | BLASTN svg | BLASTP svg |
NC_010793:668500 | 668500 | 686099 | 17600 | Orientia tsutsugamushi str. Ikeda, complete genome | 0 | 2339 | BLASTN svg | BLASTP svg |
NC_010793:357000* | 357000 | 375626 | 18627 | Orientia tsutsugamushi str. Ikeda, complete genome | 0 | 2319 | BLASTN svg | BLASTP svg |
NC_010793:126111 | 126111 | 145490 | 19380 | Orientia tsutsugamushi str. Ikeda, complete genome | 0 | 2319 | BLASTN svg | BLASTP svg |
NC_010793:1287877 | 1287877 | 1306454 | 18578 | Orientia tsutsugamushi str. Ikeda, complete genome | 0 | 2317 | BLASTN svg | BLASTP svg |
NC_010793:1695716 | 1695716 | 1718099 | 22384 | Orientia tsutsugamushi str. Ikeda, complete genome | 0 | 2248 | BLASTN svg | BLASTP svg |
NC_010793:1468849 | 1468849 | 1488099 | 19251 | Orientia tsutsugamushi str. Ikeda, complete genome | 0 | 2143 | BLASTN svg | BLASTP svg |
NC_010793:1075388* | 1075388 | 1103743 | 28356 | Orientia tsutsugamushi str. Ikeda, complete genome | 0 | 1063 | BLASTN svg | BLASTP svg |
NC_010793:30488* | 30488 | 50392 | 19905 | Orientia tsutsugamushi str. Ikeda, complete genome | 0 | 995 | BLASTN svg | BLASTP svg |
NC_010793:541040 | 541040 | 574148 | 33109 | Orientia tsutsugamushi str. Ikeda, complete genome | 0 | 922 | BLASTN svg | BLASTP svg |
NC_010793:721944 | 721944 | 745827 | 23884 | Orientia tsutsugamushi str. Ikeda, complete genome | 0 | 918 | BLASTN svg | BLASTP svg |
NC_010793:81219* | 81219 | 104392 | 23174 | Orientia tsutsugamushi str. Ikeda, complete genome | 0 | 694 | BLASTN svg | BLASTP svg |
NC_014228:4360676* | 4360676 | 4384992 | 24317 | Xenorhabdus nematophila ATCC 19061, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_009350:137645 | 137645 | 164499 | 26855 | Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, complete | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_005956:818000* | 818000 | 840099 | 22100 | Bartonella henselae str. Houston-1, complete genome | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_007109:894000 | 894000 | 916099 | 22100 | Rickettsia felis URRWXCal2, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |