Pre_GI: BLASTN Hits

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Query: NC_009482:156171 Synechococcus sp. RCC307 chromosome, complete genome

Start: 156171, End: 190477, Length: 34307

Host Lineage: Synechococcus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: Marine Synechococcus and Prochlorococcus are the most abundant photosynthetic organisms on earth and between them account for about half of the world's photosynthesis. RCC307 is an oceanic Synechococcus strain which presents great phylogenetic interest because trees obtained using its 16S RNA gene seem to indicate that it is rooted at the base of the radiation of marine cyanobacteria. This strain was isolated from seawater taken at a depth of 15 meters from the Mediterranean Sea.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008319:171847*17184720983837992Synechococcus sp. CC9311, complete genome7e-45190BLASTN svgBLASTP svg
NC_007516:193498*19349822327129774Synechococcus sp. CC9605, complete genome8e-26127BLASTN svgBLASTP svg
NC_005070:41926141926147386554605Synechococcus sp. WH 8102, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_012815:16039161603916165709953184Bifidobacterium animalis subsp. lactis DSM 10140, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_012814:15992411599241165827959039Bifidobacterium animalis subsp. lactis Bl-04, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_002929:52500*525008147528976Bordetella pertussis Tohama I, complete genome4e-0661.9BLASTN svgBLASTP svg