Query: NC_009480:99640 Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete
Start: 99640, End: 133801, Length: 34162
Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: Phytopathogen that causes bacterial wilt and canker of tomato (Lycopersicon esculentum). This is considered to be the most important bacterial disease of tomato causing substantial economic losses worldwide. Bacteria enter the plant by wounds on root or stem and then find their way into the xylem allowing a massive systemic colonization. The first stage of the disease is characterized by unilateral wilting of leaves. Wilting then spreads to all leaves, canker lesions develop on the stem and the plant dies. If infection occurs at a late stage of plant development, plants can survive and yield fruit that may have spots, so called bird's eyes. Often the seeds will be infected and this has been the major source for outbreaks of Clavibacter michiganensis subsp. michiganensis infections in agriculture. Members of the Clavibacter genus are known to produce antimicrobial compounds.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
---|
NC_019673:8581000* | 8581000 | 8608341 | 27342 | Saccharothrix espanaensis DSM 44229 complete genome | 3e-56 | 228 | BLASTN svg | BLASTP svg |
NC_013159:502928 | 502928 | 530821 | 27894 | Saccharomonospora viridis DSM 43017, complete genome | 2e-45 | 192 | BLASTN svg | BLASTP svg |
NC_013521:940495 | 940495 | 964099 | 23605 | Sanguibacter keddieii DSM 10542, complete genome | 1e-40 | 176 | BLASTN svg | BLASTP svg |
NC_010407:3132683 | 3132683 | 3154890 | 22208 | Clavibacter michiganensis subsp. sepedonicus chromosome, complete | 1e-40 | 176 | BLASTN svg | BLASTP svg |
NC_009479:34001 | 34001 | 56213 | 22213 | Clavibacter michiganensis subsp. michiganensis NCPPB 382 plasmid | 2e-38 | 168 | BLASTN svg | BLASTP svg |
NC_006087:2008000 | 2008000 | 2028099 | 20100 | Leifsonia xyli subsp. xyli str. CTCB07, complete genome | 2e-35 | 159 | BLASTN svg | BLASTP svg |
NC_009720:5046861* | 5046861 | 5070803 | 23943 | Xanthobacter autotrophicus Py2, complete genome | 6e-33 | 151 | BLASTN svg | BLASTP svg |
NC_014817:142976* | 142976 | 165833 | 22858 | Asticcacaulis excentricus CB 48 chromosome 2, complete sequence | 7e-17 | 97.6 | BLASTN svg | BLASTP svg |
NC_009664:4423829* | 4423829 | 4686013 | 262185 | Kineococcus radiotolerans SRS30216, complete genome | 1e-15 | 93.7 | BLASTN svg | BLASTP svg |
NC_010407:1775227 | 1775227 | 1800548 | 25322 | Clavibacter michiganensis subsp. sepedonicus chromosome, complete | 2e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_011886:404661 | 404661 | 427081 | 22421 | Arthrobacter chlorophenolicus A6, complete genome | 7e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_010407:3174470 | 3174470 | 3197545 | 23076 | Clavibacter michiganensis subsp. sepedonicus chromosome, complete | 1e-09 | 73.8 | BLASTN svg | BLASTP svg |
NC_015588:2468207 | 2468207 | 2494822 | 26616 | Isoptericola variabilis 225 chromosome, complete genome | 7e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_007333:1743890 | 1743890 | 1873648 | 129759 | Thermobifida fusca YX, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |