Pre_GI: BLASTN Hits

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Query: NC_009380:636000 Salinispora tropica CNB-440 chromosome, complete genome

Start: 636000, End: 659939, Length: 23940

Host Lineage: Salinispora tropica; Salinispora; Micromonosporaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from coarse beach sand off the Bahamas. An obligate marine actinomycete. Salinispora strains are commonly isolated from tropical marine sediment. Members of this genus produce branched hyphae and require media which contain seawater or sodium. A survey of the cultured species identified over 90 isolates which produce compounds that inhibited cancer cells. These organisms may be a new source of bioactive chemicals for use in disease and cancer treatments. This species produces the chemicals salinosporamide A and B which may be useful for cancer treatment.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_014815:841484*84148489809956616Micromonospora sp. L5 chromosome, complete genome5e-88333BLASTN svgBLASTP svg
NC_015434:26836312683631270625822628Verrucosispora maris AB-18-032 chromosome, complete genome1e-45192BLASTN svgBLASTP svg
NC_014391:621062*62106264468923628Micromonospora aurantiaca ATCC 27029 chromosome, complete genome2e-41178BLASTN svgBLASTP svg
NC_013757:78083578083581363532801Geodermatophilus obscurus DSM 43160, complete genome2e-25125BLASTN svgBLASTP svg
NC_009142:17010001701000172876327764Saccharopolyspora erythraea NRRL 2338, complete genome2e-19105BLASTN svgBLASTP svg
NC_019673:8161242*8161242818734226101Saccharothrix espanaensis DSM 44229 complete genome3e-18101BLASTN svgBLASTP svg
NC_014391:1967167*1967167200915941993Micromonospora aurantiaca ATCC 27029 chromosome, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_014391:2579919*2579919261467434756Micromonospora aurantiaca ATCC 27029 chromosome, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_014666:81985548198554822359925046Frankia sp. EuI1c chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_008095:4189082*4189082423409745016Myxococcus xanthus DK 1622, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_013510:991827*991827101259920773Thermomonospora curvata DSM 43183, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_015434:4640769*4640769466756226794Verrucosispora maris AB-18-032 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_012490:44254564425456444448419029Rhodococcus erythropolis PR4, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_008751:607209*60720963021323005Desulfovibrio vulgaris subsp. vulgaris DP4, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_019902:831911*83191186394132031Thioalkalivibrio nitratireducens DSM 14787, complete genome3e-0661.9BLASTN svgBLASTP svg