Pre_GI: BLASTN Hits

Some Help

Query: NC_009380:4944183 Salinispora tropica CNB-440 chromosome, complete genome

Start: 4944183, End: 4962760, Length: 18578

Host Lineage: Salinispora tropica; Salinispora; Micromonosporaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from coarse beach sand off the Bahamas. An obligate marine actinomycete. Salinispora strains are commonly isolated from tropical marine sediment. Members of this genus produce branched hyphae and require media which contain seawater or sodium. A survey of the cultured species identified over 90 isolates which produce compounds that inhibited cancer cells. These organisms may be a new source of bioactive chemicals for use in disease and cancer treatments. This species produces the chemicals salinosporamide A and B which may be useful for cancer treatment.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_018681:3541484*3541484357298031497Nocardia brasiliensis ATCC 700358 chromosome, complete genome2e-93351BLASTN svgBLASTP svg
NC_014391:4617688*4617688463728919602Micromonospora aurantiaca ATCC 27029 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_015859:33464733346473337186825396Corynebacterium variabile DSM 44702 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015690:1818333*18183331947673129341Paenibacillus mucilaginosus KNP414 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_013093:7722436*7722436776426141826Actinosynnema mirum DSM 43827, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_008278:2772726*2772726280322330498Frankia alni ACN14a, complete genome2e-0661.9BLASTN svgBLASTP svg