Pre_GI: BLASTN Hits

Some Help

Query: NC_009380:2664419 Salinispora tropica CNB-440 chromosome, complete genome

Start: 2664419, End: 2689337, Length: 24919

Host Lineage: Salinispora tropica; Salinispora; Micromonosporaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from coarse beach sand off the Bahamas. An obligate marine actinomycete. Salinispora strains are commonly isolated from tropical marine sediment. Members of this genus produce branched hyphae and require media which contain seawater or sodium. A survey of the cultured species identified over 90 isolates which produce compounds that inhibited cancer cells. These organisms may be a new source of bioactive chemicals for use in disease and cancer treatments. This species produces the chemicals salinosporamide A and B which may be useful for cancer treatment.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015434:3581001*3581001361002729027Verrucosispora maris AB-18-032 chromosome, complete genome01423BLASTN svgBLASTP svg
NC_014815:56030005603000562327720278Micromonospora sp. L5 chromosome, complete genome01308BLASTN svgBLASTP svg
NC_014391:35968123596812361791421103Micromonospora aurantiaca ATCC 27029 chromosome, complete genome2e-56228BLASTN svgBLASTP svg
NC_018691:30820003082000310649724498Alcanivorax dieselolei B5 chromosome, complete genome6e-26127BLASTN svgBLASTP svg
NC_015957:73482697348269739671748449Streptomyces violaceusniger Tu 4113 chromosome, complete genome4e-21111BLASTN svgBLASTP svg
NC_010571:2423732*2423732244807724346Opitutus terrae PB90-1, complete genome4e-21111BLASTN svgBLASTP svg
NC_014931:25114232511423253417122749Variovorax paradoxus EPS chromosome, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_016010:65949659499248826540Xanthomonas axonopodis pv. citrumelo F1 chromosome, complete8e-1383.8BLASTN svgBLASTP svg
NC_018750:1092224*1092224111223520012Streptomyces venezuelae ATCC 10712, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_007508:64955649559213227178Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_011662:23749552374955239350718553Thauera sp. MZ1T, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_008025:1998500*1998500202271224213Deinococcus geothermalis DSM 11300, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_013209:2582878*2582878262254039663Acetobacter pasteurianus IFO 3283-01, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_021064:1211480*1211480123950528026Propionibacterium avidum 44067, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010162:27177412717741274274925009Sorangium cellulosum 'So ce 56', complete genome7e-0763.9BLASTN svgBLASTP svg