Query: NC_009092:3682413 Shewanella loihica PV-4, complete genome
Start: 3682413, End: 3701943, Length: 19531
Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria
General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_009092:1504363 | 1504363 | 1580103 | 75741 | Shewanella loihica PV-4, complete genome | 2e-50 | 208 | BLASTN svg | BLASTP svg |
NC_009092:3239500 | 3239500 | 3261290 | 21791 | Shewanella loihica PV-4, complete genome | 6e-50 | 206 | BLASTN svg | BLASTP svg |
NC_009092:3783000 | 3783000 | 3802099 | 19100 | Shewanella loihica PV-4, complete genome | 1e-38 | 168 | BLASTN svg | BLASTP svg |
NC_009092:1305355 | 1305355 | 1328936 | 23582 | Shewanella loihica PV-4, complete genome | 5e-26 | 127 | BLASTN svg | BLASTP svg |
NC_009092:2644164 | 2644164 | 2669291 | 25128 | Shewanella loihica PV-4, complete genome | 2e-22 | 115 | BLASTN svg | BLASTP svg |
NC_009092:3057319* | 3057319 | 3084097 | 26779 | Shewanella loihica PV-4, complete genome | 7e-19 | 103 | BLASTN svg | BLASTP svg |
NC_009997:2635025 | 2635025 | 2666893 | 31869 | Shewanella baltica OS195, complete genome | 1e-17 | 99.6 | BLASTN svg | BLASTP svg |
NC_009092:1047500* | 1047500 | 1072729 | 25230 | Shewanella loihica PV-4, complete genome | 7e-16 | 93.7 | BLASTN svg | BLASTP svg |
NC_009092:2529518 | 2529518 | 2552506 | 22989 | Shewanella loihica PV-4, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_014012:3812754* | 3812754 | 3834296 | 21543 | Shewanella violacea DSS12, complete genome | 2e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_009831:3092126* | 3092126 | 3113326 | 21201 | Shewanella sediminis HAW-EB3, complete genome | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_009092:261778 | 261778 | 284599 | 22822 | Shewanella loihica PV-4, complete genome | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_014541:1996811 | 1996811 | 2021599 | 24789 | Ferrimonas balearica DSM 9799 chromosome, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_009901:3563264 | 3563264 | 3584099 | 20836 | Shewanella pealeana ATCC 700345, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |