Pre_GI: BLASTN Hits

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Query: NC_009012:1901492 Clostridium thermocellum ATCC 27405, complete genome

Start: 1901492, End: 1923064, Length: 21573

Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015687:27964127964130219622556Clostridium acetobutylicum DSM 1731 chromosome, complete genome1e-29139BLASTN svgBLASTP svg
NC_003030:27964327964330219822556Clostridium acetobutylicum ATCC 824, complete genome1e-29139BLASTN svgBLASTP svg
NC_020389:71417871417873707322896Methanosarcina mazei Tuc01, complete genome8e-28133BLASTN svgBLASTP svg
NC_003901:86024286024288409923858Methanosarcina mazei Go1, complete genome2e-25125BLASTN svgBLASTP svg
NC_014328:25889942588994260699318000Clostridium ljungdahlii ATCC 49587 chromosome, complete genome7e-19103BLASTN svgBLASTP svg
NC_014328:52204552204554516023116Clostridium ljungdahlii ATCC 49587 chromosome, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_003552:47826354782635480759924965Methanosarcina acetivorans C2A, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_021182:34386013438601346026021660Clostridium pasteurianum BC1, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_012225:10154521015452103934323892Brachyspira hyodysenteriae WA1, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_021182:10777211077721109639718677Clostridium pasteurianum BC1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014150:2088012*2088012212109933088Brachyspira murdochii DSM 12563 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_009437:25791612579161262292443764Caldicellulosiruptor saccharolyticus DSM 8903, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_014166:33138*331385604122904Arcobacter nitrofigilis DSM 7299 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015636:11230531123053114623723185Methanothermococcus okinawensis IH1 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015500:782237822310560027378Treponema brennaborense DSM 12168 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg