Pre_GI: BLASTN Hits

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Query: NC_009012:1595498 Clostridium thermocellum ATCC 27405, complete genome

Start: 1595498, End: 1618175, Length: 22678

Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_020134:2193900*2193900221445220553Clostridium stercorarium subsp. stercorarium DSM 8532, complete8e-62246BLASTN svgBLASTP svg
NC_015687:3326461*3326461335126824808Clostridium acetobutylicum DSM 1731 chromosome, complete genome6e-38167BLASTN svgBLASTP svg
NC_003030:3324834*3324834334964224809Clostridium acetobutylicum ATCC 824, complete genome6e-38167BLASTN svgBLASTP svg
NC_014328:4471995*4471995450215530161Clostridium ljungdahlii ATCC 49587 chromosome, complete genome9e-34153BLASTN svgBLASTP svg
NC_010516:3807780*3807780384035532576Clostridium botulinum B1 str. Okra, complete genome1e-29139BLASTN svgBLASTP svg
NC_003869:94800094800097076722768Thermoanaerobacter tengcongensis MB4, complete genome1e-29139BLASTN svgBLASTP svg
NC_012563:4004709*4004709403727332565Clostridium botulinum A2 str. Kyoto, complete genome3e-27131BLASTN svgBLASTP svg
NC_014393:4541000*4541000456644025441Clostridium cellulovorans 743B chromosome, complete genome8e-25123BLASTN svgBLASTP svg
NC_021182:4602683*4602683462770125019Clostridium pasteurianum BC1, complete genome3e-24121BLASTN svgBLASTP svg
NC_014721:1629063*1629063165209923037Caldicellulosiruptor kristjanssonii 177R1B chromosome, complete3e-21111BLASTN svgBLASTP svg
NC_008262:2649289*2649289270467655388Clostridium perfringens SM101, complete genome3e-21111BLASTN svgBLASTP svg
NC_008593:153014*15301417175318740Clostridium novyi NT, complete genome8e-19103BLASTN svgBLASTP svg
NC_010674:192951*19295121941726467Clostridium botulinum B str. Eklund 17B, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_010628:67544567544570106925625Nostoc punctiforme PCC 73102, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_009922:2323083*2323083234856125479Alkaliphilus oremlandii OhILAs, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_004557:162670*16267018073018061Clostridium tetani E88, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_020291:117983*11798315068032698Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome3e-1281.8BLASTN svgBLASTP svg
NC_010001:2836995*2836995286257025576Clostridium phytofermentans ISDg, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_018515:4148037*4148037416623318197Desulfosporosinus meridiei DSM 13257 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_010723:173280*17328022135248073Clostridium botulinum E3 str. Alaska E43, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_012781:4065*40652459920535Eubacterium rectale ATCC 33656, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015519:686027*68602770564819622Tepidanaerobacter sp. Re1 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_002570:1426000*1426000145044224443Bacillus halodurans C-125, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_011884:29216182921618294607124454Cyanothece sp. PCC 7425, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014657:914071*91407193981425744Caldicellulosiruptor owensensis OL chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_021184:56965356965359100021348Desulfotomaculum gibsoniae DSM 7213, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_006833:637964*63796465659918636Wolbachia endosymbiont strain TRS of Brugia malayi, complete2e-0765.9BLASTN svgBLASTP svg
NC_004606:90432390432392357019248Streptococcus pyogenes SSI-1, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_004070:77228177228179114218862Streptococcus pyogenes MGAS315, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_021182:2192718*2192718221646323746Clostridium pasteurianum BC1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_019970:1457794*1457794148061622823Thermoanaerobacterium thermosaccharolyticum M0795, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011296:102650*10265012914226493Thermodesulfovibrio yellowstonii DSM 11347, complete genome3e-0661.9BLASTN svgBLASTP svg