Query: NC_009012:1595498 Clostridium thermocellum ATCC 27405, complete genome
Start: 1595498, End: 1618175, Length: 22678
Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria
General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_020134:2193900* | 2193900 | 2214452 | 20553 | Clostridium stercorarium subsp. stercorarium DSM 8532, complete | 8e-62 | 246 | BLASTN svg | BLASTP svg |
NC_015687:3326461* | 3326461 | 3351268 | 24808 | Clostridium acetobutylicum DSM 1731 chromosome, complete genome | 6e-38 | 167 | BLASTN svg | BLASTP svg |
NC_003030:3324834* | 3324834 | 3349642 | 24809 | Clostridium acetobutylicum ATCC 824, complete genome | 6e-38 | 167 | BLASTN svg | BLASTP svg |
NC_014328:4471995* | 4471995 | 4502155 | 30161 | Clostridium ljungdahlii ATCC 49587 chromosome, complete genome | 9e-34 | 153 | BLASTN svg | BLASTP svg |
NC_010516:3807780* | 3807780 | 3840355 | 32576 | Clostridium botulinum B1 str. Okra, complete genome | 1e-29 | 139 | BLASTN svg | BLASTP svg |
NC_003869:948000 | 948000 | 970767 | 22768 | Thermoanaerobacter tengcongensis MB4, complete genome | 1e-29 | 139 | BLASTN svg | BLASTP svg |
NC_012563:4004709* | 4004709 | 4037273 | 32565 | Clostridium botulinum A2 str. Kyoto, complete genome | 3e-27 | 131 | BLASTN svg | BLASTP svg |
NC_014393:4541000* | 4541000 | 4566440 | 25441 | Clostridium cellulovorans 743B chromosome, complete genome | 8e-25 | 123 | BLASTN svg | BLASTP svg |
NC_021182:4602683* | 4602683 | 4627701 | 25019 | Clostridium pasteurianum BC1, complete genome | 3e-24 | 121 | BLASTN svg | BLASTP svg |
NC_014721:1629063* | 1629063 | 1652099 | 23037 | Caldicellulosiruptor kristjanssonii 177R1B chromosome, complete | 3e-21 | 111 | BLASTN svg | BLASTP svg |
NC_008262:2649289* | 2649289 | 2704676 | 55388 | Clostridium perfringens SM101, complete genome | 3e-21 | 111 | BLASTN svg | BLASTP svg |
NC_008593:153014* | 153014 | 171753 | 18740 | Clostridium novyi NT, complete genome | 8e-19 | 103 | BLASTN svg | BLASTP svg |
NC_010674:192951* | 192951 | 219417 | 26467 | Clostridium botulinum B str. Eklund 17B, complete genome | 8e-16 | 93.7 | BLASTN svg | BLASTP svg |
NC_010628:675445 | 675445 | 701069 | 25625 | Nostoc punctiforme PCC 73102, complete genome | 3e-15 | 91.7 | BLASTN svg | BLASTP svg |
NC_009922:2323083* | 2323083 | 2348561 | 25479 | Alkaliphilus oremlandii OhILAs, complete genome | 5e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_004557:162670* | 162670 | 180730 | 18061 | Clostridium tetani E88, complete genome | 5e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_020291:117983* | 117983 | 150680 | 32698 | Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_010001:2836995* | 2836995 | 2862570 | 25576 | Clostridium phytofermentans ISDg, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_018515:4148037* | 4148037 | 4166233 | 18197 | Desulfosporosinus meridiei DSM 13257 chromosome, complete genome | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_010723:173280* | 173280 | 221352 | 48073 | Clostridium botulinum E3 str. Alaska E43, complete genome | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_012781:4065* | 4065 | 24599 | 20535 | Eubacterium rectale ATCC 33656, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_015519:686027* | 686027 | 705648 | 19622 | Tepidanaerobacter sp. Re1 chromosome, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_002570:1426000* | 1426000 | 1450442 | 24443 | Bacillus halodurans C-125, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_011884:2921618 | 2921618 | 2946071 | 24454 | Cyanothece sp. PCC 7425, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_014657:914071* | 914071 | 939814 | 25744 | Caldicellulosiruptor owensensis OL chromosome, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_021184:569653 | 569653 | 591000 | 21348 | Desulfotomaculum gibsoniae DSM 7213, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_006833:637964* | 637964 | 656599 | 18636 | Wolbachia endosymbiont strain TRS of Brugia malayi, complete | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_004606:904323 | 904323 | 923570 | 19248 | Streptococcus pyogenes SSI-1, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_004070:772281 | 772281 | 791142 | 18862 | Streptococcus pyogenes MGAS315, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_021182:2192718* | 2192718 | 2216463 | 23746 | Clostridium pasteurianum BC1, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_019970:1457794* | 1457794 | 1480616 | 22823 | Thermoanaerobacterium thermosaccharolyticum M0795, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_011296:102650* | 102650 | 129142 | 26493 | Thermodesulfovibrio yellowstonii DSM 11347, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |