Query: NC_008800:4389687 Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,
Start: 4389687, End: 4412099, Length: 22413
Host Lineage: Yersinia enterocolitica; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria
General Information: This isolate (strain 8081; NCTC 13174) is a mouse-lethal serotype of Yersinia enterocolitica that contains a high pathogenicity island (HPI) that encodes an iron uptake system (yersiniabactin) and a type II secretion system. Causes gastroenteritis. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This species is a food and waterborn pathogen that causes gastroenteritis (inflammation of the mucous membranes of the stomach and intestine) and is able to proliferate at temperatures as low as 4 degrees C.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_015224:4314116 | 4314116 | 4334543 | 20428 | Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome, | 0 | 14750 | BLASTN svg | BLASTP svg |
NC_010634:4463727 | 4463727 | 4499178 | 35452 | Yersinia pseudotuberculosis PB1/+, complete genome | 0 | 644 | BLASTN svg | BLASTP svg |
NC_008150:2785830 | 2785830 | 2808099 | 22270 | Yersinia pestis Antiqua, complete genome | 6e-29 | 137 | BLASTN svg | BLASTP svg |
NC_008149:1221637 | 1221637 | 1243315 | 21679 | Yersinia pestis Nepal516, complete genome | 6e-29 | 137 | BLASTN svg | BLASTP svg |
NC_004088:1291754 | 1291754 | 1314207 | 22454 | Yersinia pestis KIM, complete genome | 6e-29 | 137 | BLASTN svg | BLASTP svg |
NC_003143:2895617 | 2895617 | 2918099 | 22483 | Yersinia pestis CO92, complete genome | 6e-29 | 137 | BLASTN svg | BLASTP svg |
AC_000091:3995233 | 3995233 | 4021223 | 25991 | Escherichia coli W3110 DNA, complete genome | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_000913:3624826* | 3624826 | 3665603 | 40778 | Escherichia coli K12, complete genome | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_009778:4188000 | 4188000 | 4230440 | 42441 | Enterobacter sakazakii ATCC BAA-894, complete genome | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_010473:3722571 | 3722571 | 3759295 | 36725 | Escherichia coli str. K-12 substr. DH10B, complete genome | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_011751:4074586 | 4074586 | 4095243 | 20658 | Escherichia coli UMN026 chromosome, complete genome | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_013592:804288 | 804288 | 834594 | 30307 | Dickeya dadantii Ech586, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_015633:1702000 | 1702000 | 1725373 | 23374 | Vibrio anguillarum 775 chromosome chromosome I, complete sequence | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
CU928145:3983432 | 3983432 | 4032688 | 49257 | Escherichia coli 55989 chromosome, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_004337:3590323* | 3590323 | 3952993 | 362671 | Shigella flexneri 2a str. 301, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_004741:4160500 | 4160500 | 4189812 | 29313 | Shigella flexneri 2a str. 2457T, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_007384:3897000 | 3897000 | 3916534 | 19535 | Shigella sonnei Ss046, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_007613:3470314 | 3470314 | 3509093 | 38780 | Shigella boydii Sb227, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_008258:3550500 | 3550500 | 3578580 | 28081 | Shigella flexneri 5 str. 8401, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_011748:3983432 | 3983432 | 4032688 | 49257 | Escherichia coli 55989, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_015380:412277* | 412277 | 435184 | 22908 | Candidatus Pelagibacter sp. IMCC9063 chromosome, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
CP002185:3822470 | 3822470 | 3859306 | 36837 | Escherichia coli W, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |