Query: NC_008463:5313527 Pseudomonas aeruginosa UCBPP-PA14, complete genome
Start: 5313527, End: 5355289, Length: 41763
Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria
General Information: This strain is a human clinical isolate from a human burn patient. It is infectious in mice, Caenorhabditis elegans, Drosophila melanogaster, and Arabidopsis thaliana. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_015138:2069739 | 2069739 | 2100742 | 31004 | Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete | 0 | 2262 | BLASTN svg | BLASTP svg |
NC_002516:1031386* | 1031386 | 1091964 | 60579 | Pseudomonas aeruginosa PAO1, complete genome | 0 | 1296 | BLASTN svg | BLASTP svg |
NC_008463:4566976* | 4566976 | 4603076 | 36101 | Pseudomonas aeruginosa UCBPP-PA14, complete genome | 0 | 714 | BLASTN svg | BLASTP svg |
NC_021150:3667176 | 3667176 | 3694623 | 27448 | Azotobacter vinelandii CA6, complete genome | 9e-94 | 353 | BLASTN svg | BLASTP svg |
NC_012560:3667177 | 3667177 | 3694624 | 27448 | Azotobacter vinelandii DJ, complete genome | 9e-94 | 353 | BLASTN svg | BLASTP svg |
NC_004129:5373886 | 5373886 | 5452599 | 78714 | Pseudomonas fluorescens Pf-5, complete genome | 3e-81 | 311 | BLASTN svg | BLASTP svg |
NC_021150:3698696 | 3698696 | 3721522 | 22827 | Azotobacter vinelandii CA6, complete genome | 6e-64 | 254 | BLASTN svg | BLASTP svg |
NC_012560:3698697 | 3698697 | 3721523 | 22827 | Azotobacter vinelandii DJ, complete genome | 6e-64 | 254 | BLASTN svg | BLASTP svg |
NC_006513:1379735* | 1379735 | 1462184 | 82450 | Azoarcus sp. EbN1, complete genome | 1e-52 | 216 | BLASTN svg | BLASTP svg |
NC_009138:1974935* | 1974935 | 2036064 | 61130 | Herminiimonas arsenicoxydans, complete genome | 8e-45 | 190 | BLASTN svg | BLASTP svg |
NC_011662:1041725 | 1041725 | 1060950 | 19226 | Thauera sp. MZ1T, complete genome | 7e-39 | 170 | BLASTN svg | BLASTP svg |
NC_011662:1017933 | 1017933 | 1045158 | 27226 | Thauera sp. MZ1T, complete genome | 7e-39 | 170 | BLASTN svg | BLASTP svg |
NC_010170:1498253* | 1498253 | 1546381 | 48129 | Bordetella petrii, complete genome | 5e-37 | 165 | BLASTN svg | BLASTP svg |
NC_015422:1876102 | 1876102 | 1903725 | 27624 | Alicycliphilus denitrificans K601 chromosome, complete genome | 7e-33 | 151 | BLASTN svg | BLASTP svg |
NC_015733:2581324 | 2581324 | 2634334 | 53011 | Pseudomonas putida S16 chromosome, complete genome | 1e-31 | 147 | BLASTN svg | BLASTP svg |
NC_003919:2639080 | 2639080 | 2659290 | 20211 | Xanthomonas axonopodis pv. citri str. 306, complete genome | 4e-31 | 145 | BLASTN svg | BLASTP svg |
NC_015379:2417312* | 2417312 | 2464599 | 47288 | Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome, | 2e-27 | 133 | BLASTN svg | BLASTP svg |
NC_009512:3334579 | 3334579 | 3362674 | 28096 | Pseudomonas putida F1, complete genome | 2e-27 | 133 | BLASTN svg | BLASTP svg |
NC_011992:1213726 | 1213726 | 1232798 | 19073 | Acidovorax ebreus TPSY, complete genome | 4e-25 | 125 | BLASTN svg | BLASTP svg |
NC_012691:2614603* | 2614603 | 2727599 | 112997 | Tolumonas auensis DSM 9187, complete genome | 2e-24 | 123 | BLASTN svg | BLASTP svg |
NC_011901:2983555 | 2983555 | 3002099 | 18545 | Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete | 6e-24 | 121 | BLASTN svg | BLASTP svg |
NC_008344:49039* | 49039 | 134599 | 85561 | Nitrosomonas eutropha C91, complete genome | 1e-22 | 117 | BLASTN svg | BLASTP svg |
NC_010501:3671517 | 3671517 | 3704599 | 33083 | Pseudomonas putida W619, complete genome | 9e-20 | 107 | BLASTN svg | BLASTP svg |
NC_007492:3462929* | 3462929 | 3509406 | 46478 | Pseudomonas fluorescens PfO-1, complete genome | 9e-20 | 107 | BLASTN svg | BLASTP svg |
NC_010170:1417615 | 1417615 | 1441654 | 24040 | Bordetella petrii, complete genome | 1e-18 | 103 | BLASTN svg | BLASTP svg |
NC_012660:1737423* | 1737423 | 1766164 | 28742 | Pseudomonas fluorescens SBW25 chromosome, complete genome | 1e-15 | 93.7 | BLASTN svg | BLASTP svg |
NC_012912:483390 | 483390 | 525764 | 42375 | Dickeya zeae Ech1591, complete genome | 9e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_004578:20738 | 20738 | 69606 | 48869 | Pseudomonas syringae pv. tomato str. DC3000, complete genome | 9e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_011770:3735162* | 3735162 | 3763836 | 28675 | Pseudomonas aeruginosa LESB58, complete genome | 1e-12 | 83.8 | BLASTN svg | BLASTP svg |
NC_012660:2045398* | 2045398 | 2108496 | 63099 | Pseudomonas fluorescens SBW25 chromosome, complete genome | 1e-12 | 83.8 | BLASTN svg | BLASTP svg |
NC_010002:4572573* | 4572573 | 4618583 | 46011 | Delftia acidovorans SPH-1, complete genome | 5e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_010170:1551923 | 1551923 | 1572599 | 20677 | Bordetella petrii, complete genome | 2e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_004578:895019* | 895019 | 921692 | 26674 | Pseudomonas syringae pv. tomato str. DC3000, complete genome | 8e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_011901:625712 | 625712 | 665313 | 39602 | Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete | 5e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_007005:1605000 | 1605000 | 1624916 | 19917 | Pseudomonas syringae pv. syringae B728a, complete genome | 2e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_010688:2850164 | 2850164 | 2871002 | 20839 | Xanthomonas campestris pv. campestris, complete genome | 8e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_008825:2564965 | 2564965 | 2589660 | 24696 | Methylibium petroleiphilum PM1, complete genome | 5e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_007005:1636875 | 1636875 | 1679814 | 42940 | Pseudomonas syringae pv. syringae B728a, complete genome | 5e-06 | 61.9 | BLASTN svg | BLASTP svg |