Pre_GI: BLASTN Hits

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Query: NC_008463:5313527 Pseudomonas aeruginosa UCBPP-PA14, complete genome

Start: 5313527, End: 5355289, Length: 41763

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is a human clinical isolate from a human burn patient. It is infectious in mice, Caenorhabditis elegans, Drosophila melanogaster, and Arabidopsis thaliana. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015138:20697392069739210074231004Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete02262BLASTN svgBLASTP svg
NC_002516:1031386*1031386109196460579Pseudomonas aeruginosa PAO1, complete genome01296BLASTN svgBLASTP svg
NC_008463:4566976*4566976460307636101Pseudomonas aeruginosa UCBPP-PA14, complete genome0714BLASTN svgBLASTP svg
NC_021150:36671763667176369462327448Azotobacter vinelandii CA6, complete genome9e-94353BLASTN svgBLASTP svg
NC_012560:36671773667177369462427448Azotobacter vinelandii DJ, complete genome9e-94353BLASTN svgBLASTP svg
NC_004129:53738865373886545259978714Pseudomonas fluorescens Pf-5, complete genome3e-81311BLASTN svgBLASTP svg
NC_021150:36986963698696372152222827Azotobacter vinelandii CA6, complete genome6e-64254BLASTN svgBLASTP svg
NC_012560:36986973698697372152322827Azotobacter vinelandii DJ, complete genome6e-64254BLASTN svgBLASTP svg
NC_006513:1379735*1379735146218482450Azoarcus sp. EbN1, complete genome1e-52216BLASTN svgBLASTP svg
NC_009138:1974935*1974935203606461130Herminiimonas arsenicoxydans, complete genome8e-45190BLASTN svgBLASTP svg
NC_011662:10417251041725106095019226Thauera sp. MZ1T, complete genome7e-39170BLASTN svgBLASTP svg
NC_011662:10179331017933104515827226Thauera sp. MZ1T, complete genome7e-39170BLASTN svgBLASTP svg
NC_010170:1498253*1498253154638148129Bordetella petrii, complete genome5e-37165BLASTN svgBLASTP svg
NC_015422:18761021876102190372527624Alicycliphilus denitrificans K601 chromosome, complete genome7e-33151BLASTN svgBLASTP svg
NC_015733:25813242581324263433453011Pseudomonas putida S16 chromosome, complete genome1e-31147BLASTN svgBLASTP svg
NC_003919:26390802639080265929020211Xanthomonas axonopodis pv. citri str. 306, complete genome4e-31145BLASTN svgBLASTP svg
NC_015379:2417312*2417312246459947288Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,2e-27133BLASTN svgBLASTP svg
NC_009512:33345793334579336267428096Pseudomonas putida F1, complete genome2e-27133BLASTN svgBLASTP svg
NC_011992:12137261213726123279819073Acidovorax ebreus TPSY, complete genome4e-25125BLASTN svgBLASTP svg
NC_012691:2614603*26146032727599112997Tolumonas auensis DSM 9187, complete genome2e-24123BLASTN svgBLASTP svg
NC_011901:29835552983555300209918545Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete6e-24121BLASTN svgBLASTP svg
NC_008344:49039*4903913459985561Nitrosomonas eutropha C91, complete genome1e-22117BLASTN svgBLASTP svg
NC_010501:36715173671517370459933083Pseudomonas putida W619, complete genome9e-20107BLASTN svgBLASTP svg
NC_007492:3462929*3462929350940646478Pseudomonas fluorescens PfO-1, complete genome9e-20107BLASTN svgBLASTP svg
NC_010170:14176151417615144165424040Bordetella petrii, complete genome1e-18103BLASTN svgBLASTP svg
NC_012660:1737423*1737423176616428742Pseudomonas fluorescens SBW25 chromosome, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_012912:48339048339052576442375Dickeya zeae Ech1591, complete genome9e-1487.7BLASTN svgBLASTP svg
NC_004578:20738207386960648869Pseudomonas syringae pv. tomato str. DC3000, complete genome9e-1487.7BLASTN svgBLASTP svg
NC_011770:3735162*3735162376383628675Pseudomonas aeruginosa LESB58, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_012660:2045398*2045398210849663099Pseudomonas fluorescens SBW25 chromosome, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_010002:4572573*4572573461858346011Delftia acidovorans SPH-1, complete genome5e-1281.8BLASTN svgBLASTP svg
NC_010170:15519231551923157259920677Bordetella petrii, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_004578:895019*89501992169226674Pseudomonas syringae pv. tomato str. DC3000, complete genome8e-1177.8BLASTN svgBLASTP svg
NC_011901:62571262571266531339602Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete5e-0971.9BLASTN svgBLASTP svg
NC_007005:16050001605000162491619917Pseudomonas syringae pv. syringae B728a, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_010688:28501642850164287100220839Xanthomonas campestris pv. campestris, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_008825:25649652564965258966024696Methylibium petroleiphilum PM1, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_007005:16368751636875167981442940Pseudomonas syringae pv. syringae B728a, complete genome5e-0661.9BLASTN svgBLASTP svg