Pre_GI: BLASTN Hits

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Query: NC_008278:613329 Frankia alni ACN14a, complete genome

Start: 613329, End: 634954, Length: 21626

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015656:632960*63296066311030151Frankia symbiont of Datisca glomerata chromosome, complete genome5e-91343BLASTN svgBLASTP svg
NC_015656:48508334850833487124120409Frankia symbiont of Datisca glomerata chromosome, complete genome2e-77297BLASTN svgBLASTP svg
NC_015656:2484749*2484749251548430736Frankia symbiont of Datisca glomerata chromosome, complete genome2e-28135BLASTN svgBLASTP svg
NC_015656:16534501653450168062227173Frankia symbiont of Datisca glomerata chromosome, complete genome2e-28135BLASTN svgBLASTP svg
NC_015656:16183291618329163809919771Frankia symbiont of Datisca glomerata chromosome, complete genome2e-28135BLASTN svgBLASTP svg
NC_015656:14695011469501148804818548Frankia symbiont of Datisca glomerata chromosome, complete genome2e-28135BLASTN svgBLASTP svg
NC_015656:105840*10584012383817999Frankia symbiont of Datisca glomerata chromosome, complete genome5e-26127BLASTN svgBLASTP svg
NC_015656:132633*13263316991437282Frankia symbiont of Datisca glomerata chromosome, complete genome5e-26127BLASTN svgBLASTP svg
NC_009921:86489948648994867311024117Frankia sp. EAN1pec, complete genome3e-24121BLASTN svgBLASTP svg
NC_009921:3473854*3473854352959955746Frankia sp. EAN1pec, complete genome3e-24121BLASTN svgBLASTP svg
NC_009921:32558333255833327496419132Frankia sp. EAN1pec, complete genome8e-22113BLASTN svgBLASTP svg
NC_007777:29645002964500299050526006Frankia sp. CcI3, complete genome8e-22113BLASTN svgBLASTP svg
NC_007777:30009413000941302809927159Frankia sp. CcI3, complete genome1e-20109BLASTN svgBLASTP svg
NC_009921:565947*56594758537019424Frankia sp. EAN1pec, complete genome3e-18101BLASTN svgBLASTP svg
NC_007777:4892150*4892150493295540806Frankia sp. CcI3, complete genome3e-18101BLASTN svgBLASTP svg
NC_015656:454500*45450048384529346Frankia symbiont of Datisca glomerata chromosome, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_013947:62218776221877624561223736Stackebrandtia nassauensis DSM 44728 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_008278:5012000*5012000505245140452Frankia alni ACN14a, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_008705:17902221790222183895348732Mycobacterium sp. KMS, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_008726:54910254910257820229101Mycobacterium vanbaalenii PYR-1, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_009077:17256831725683177988554203Mycobacterium sp. JLS, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_009077:2308634*2308634235649847865Mycobacterium sp. JLS, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_014814:16937416937419709927726Mycobacterium sp. Spyr1 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_008146:17480261748026180688658861Mycobacterium sp. MCS, complete genome7e-1073.8BLASTN svgBLASTP svg