Query: NC_008278:4023918 Frankia alni ACN14a, complete genome
Start: 4023918, End: 4061507, Length: 37590
Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_007777:2638580 | 2638580 | 2671262 | 32683 | Frankia sp. CcI3, complete genome | 0 | 2298 | BLASTN svg | BLASTP svg |
| NC_014815:2363460* | 2363460 | 2391027 | 27568 | Micromonospora sp. L5 chromosome, complete genome | 0 | 900 | BLASTN svg | BLASTP svg |
| NC_014666:8198554 | 8198554 | 8223599 | 25046 | Frankia sp. EuI1c chromosome, complete genome | 0 | 728 | BLASTN svg | BLASTP svg |
| NC_009921:4948500 | 4948500 | 4976777 | 28278 | Frankia sp. EAN1pec, complete genome | 0 | 666 | BLASTN svg | BLASTP svg |
| NC_019673:895418 | 895418 | 916384 | 20967 | Saccharothrix espanaensis DSM 44229 complete genome | 1e-58 | 236 | BLASTN svg | BLASTP svg |
| NC_015656:2795784 | 2795784 | 2818829 | 23046 | Frankia symbiont of Datisca glomerata chromosome, complete genome | 2e-51 | 212 | BLASTN svg | BLASTP svg |
| NC_006087:885760 | 885760 | 912599 | 26840 | Leifsonia xyli subsp. xyli str. CTCB07, complete genome | 2e-26 | 129 | BLASTN svg | BLASTP svg |
| NC_009921:1668306* | 1668306 | 1725986 | 57681 | Frankia sp. EAN1pec, complete genome | 1e-15 | 93.7 | BLASTN svg | BLASTP svg |
| NC_015376:1185000 | 1185000 | 1204562 | 19563 | Burkholderia gladioli BSR3 chromosome chromosome 2, complete | 1e-15 | 93.7 | BLASTN svg | BLASTP svg |
| NC_014165:2081914 | 2081914 | 2102115 | 20202 | Thermobispora bispora DSM 43833 chromosome, complete genome | 5e-15 | 91.7 | BLASTN svg | BLASTP svg |
| NC_014318:5183975 | 5183975 | 5206099 | 22125 | Amycolatopsis mediterranei U32 chromosome, complete genome | 3e-13 | 85.7 | BLASTN svg | BLASTP svg |
| NC_010002:3357752 | 3357752 | 3383796 | 26045 | Delftia acidovorans SPH-1, complete genome | 3e-13 | 85.7 | BLASTN svg | BLASTP svg |
| NC_010557:207846 | 207846 | 228516 | 20671 | Burkholderia ambifaria MC40-6 chromosome 3, complete sequence | 1e-12 | 83.8 | BLASTN svg | BLASTP svg |
| NC_013169:2104597 | 2104597 | 2125757 | 21161 | Kytococcus sedentarius DSM 20547, complete genome | 3e-10 | 75.8 | BLASTN svg | BLASTP svg |
| NC_014217:4550544 | 4550544 | 4589157 | 38614 | Starkeya novella DSM 506 chromosome, complete genome | 2e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_020126:10117469* | 10117469 | 10136954 | 19486 | Myxococcus stipitatus DSM 14675, complete genome | 7e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_002677:1716000 | 1716000 | 1738006 | 22007 | Mycobacterium leprae TN, complete genome | 3e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_008095:8890464* | 8890464 | 8919599 | 29136 | Myxococcus xanthus DK 1622, complete genome | 3e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_009921:8549757 | 8549757 | 8622615 | 72859 | Frankia sp. EAN1pec, complete genome | 3e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_011896:1716000 | 1716000 | 1737939 | 21940 | Mycobacterium leprae Br4923, complete genome | 3e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_020260:3355814 | 3355814 | 3381531 | 25718 | Cronobacter sakazakii Sp291, complete genome | 3e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_020260:440000* | 440000 | 468196 | 28197 | Cronobacter sakazakii Sp291, complete genome | 3e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_013850:4829455* | 4829455 | 4859504 | 30050 | Klebsiella variicola At-22 chromosome, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
| NC_012724:1914740 | 1914740 | 1940495 | 25756 | Burkholderia glumae BGR1 chromosome 1, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
| NC_014831:2258398 | 2258398 | 2298099 | 39702 | Thermaerobacter marianensis DSM 12885 chromosome, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_014165:2533040 | 2533040 | 2563805 | 30766 | Thermobispora bispora DSM 43833 chromosome, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_008278:6717485* | 6717485 | 6740989 | 23505 | Frankia alni ACN14a, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_008278:667023 | 667023 | 690099 | 23077 | Frankia alni ACN14a, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |