Pre_GI: BLASTN Hits

Some Help

Query: NC_008278:4023918 Frankia alni ACN14a, complete genome

Start: 4023918, End: 4061507, Length: 37590

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_007777:26385802638580267126232683Frankia sp. CcI3, complete genome02298BLASTN svgBLASTP svg
NC_014815:2363460*2363460239102727568Micromonospora sp. L5 chromosome, complete genome0900BLASTN svgBLASTP svg
NC_014666:81985548198554822359925046Frankia sp. EuI1c chromosome, complete genome0728BLASTN svgBLASTP svg
NC_009921:49485004948500497677728278Frankia sp. EAN1pec, complete genome0666BLASTN svgBLASTP svg
NC_019673:89541889541891638420967Saccharothrix espanaensis DSM 44229 complete genome1e-58236BLASTN svgBLASTP svg
NC_015656:27957842795784281882923046Frankia symbiont of Datisca glomerata chromosome, complete genome2e-51212BLASTN svgBLASTP svg
NC_006087:88576088576091259926840Leifsonia xyli subsp. xyli str. CTCB07, complete genome2e-26129BLASTN svgBLASTP svg
NC_009921:1668306*1668306172598657681Frankia sp. EAN1pec, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_015376:11850001185000120456219563Burkholderia gladioli BSR3 chromosome chromosome 2, complete1e-1593.7BLASTN svgBLASTP svg
NC_014165:20819142081914210211520202Thermobispora bispora DSM 43833 chromosome, complete genome5e-1591.7BLASTN svgBLASTP svg
NC_014318:51839755183975520609922125Amycolatopsis mediterranei U32 chromosome, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_010002:33577523357752338379626045Delftia acidovorans SPH-1, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_010557:20784620784622851620671Burkholderia ambifaria MC40-6 chromosome 3, complete sequence1e-1283.8BLASTN svgBLASTP svg
NC_013169:21045972104597212575721161Kytococcus sedentarius DSM 20547, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_014217:45505444550544458915738614Starkeya novella DSM 506 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_020126:10117469*101174691013695419486Myxococcus stipitatus DSM 14675, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_002677:17160001716000173800622007Mycobacterium leprae TN, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_008095:8890464*8890464891959929136Myxococcus xanthus DK 1622, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_009921:85497578549757862261572859Frankia sp. EAN1pec, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_011896:17160001716000173793921940Mycobacterium leprae Br4923, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_020260:33558143355814338153125718Cronobacter sakazakii Sp291, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_020260:440000*44000046819628197Cronobacter sakazakii Sp291, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_013850:4829455*4829455485950430050Klebsiella variicola At-22 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_012724:19147401914740194049525756Burkholderia glumae BGR1 chromosome 1, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_014831:22583982258398229809939702Thermaerobacter marianensis DSM 12885 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_014165:25330402533040256380530766Thermobispora bispora DSM 43833 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_008278:6717485*6717485674098923505Frankia alni ACN14a, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_008278:66702366702369009923077Frankia alni ACN14a, complete genome4e-0661.9BLASTN svgBLASTP svg