Pre_GI: BLASTN Hits

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Query: NC_008278:3601959 Frankia alni ACN14a, complete genome

Start: 3601959, End: 3619669, Length: 17711

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_007777:12960001296000131759921600Frankia sp. CcI3, complete genome1e-54222BLASTN svgBLASTP svg
NC_015656:632960*63296066311030151Frankia symbiont of Datisca glomerata chromosome, complete genome4e-29137BLASTN svgBLASTP svg
NC_013093:21322842132284215260320320Actinosynnema mirum DSM 43827, complete genome2e-18101BLASTN svgBLASTP svg
NC_007777:27494222749422277456125140Frankia sp. CcI3, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_008278:74477774477776316518389Frankia alni ACN14a, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_014814:85912485912490088141758Mycobacterium sp. Spyr1 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_015957:53100005310000533243022431Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_019673:2635585*2635585265953723953Saccharothrix espanaensis DSM 44229 complete genome9e-0969.9BLASTN svgBLASTP svg
NC_013235:17615391761539178059919061Nakamurella multipartita DSM 44233, complete genome5e-0763.9BLASTN svgBLASTP svg
NC_015957:10505870105058701052808222213Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_008726:47253894725389475038925001Mycobacterium vanbaalenii PYR-1, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_008705:27434*274345721729784Mycobacterium sp. KMS, complete genome8e-0660BLASTN svgBLASTP svg
NC_008146:20047*200475317433128Mycobacterium sp. MCS, complete genome8e-0660BLASTN svgBLASTP svg