Pre_GI: BLASTN Hits

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Query: NC_008278:2863355 Frankia alni ACN14a, complete genome

Start: 2863355, End: 2885112, Length: 21758

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008278:28825672882567290171919153Frankia alni ACN14a, complete genome05047BLASTN svgBLASTP svg
NC_009921:39990403999040401805519016Frankia sp. EAN1pec, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_015953:25121522512152253676224611Streptomyces sp. SirexAA-E chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_015677:285896*28589630970623811Ramlibacter tataouinensis TTB310 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008278:50538995053899508662732729Frankia alni ACN14a, complete genome6e-0763.9BLASTN svgBLASTP svg