Pre_GI: BLASTN Hits

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Query: NC_008278:2813362 Frankia alni ACN14a, complete genome

Start: 2813362, End: 2854314, Length: 40953

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_013131:7401253*7401253742304021788Catenulispora acidiphila DSM 44928, complete genome0985BLASTN svgBLASTP svg
NC_007777:25434752543475256518621712Frankia sp. CcI3, complete genome2e-162581BLASTN svgBLASTP svg
NC_008268:71806637180663722188141219Rhodococcus sp. RHA1, complete genome2e-116428BLASTN svgBLASTP svg
NC_007777:4892150*4892150493295540806Frankia sp. CcI3, complete genome2e-97365BLASTN svgBLASTP svg
NC_015312:3675148*3675148374606470917Pseudonocardia dioxanivorans CB1190 chromosome, complete genome1e-92349BLASTN svgBLASTP svg
NC_009921:4035225*4035225407387638652Frankia sp. EAN1pec, complete genome8e-88333BLASTN svgBLASTP svg
NC_009921:3384116*3384116340895324838Frankia sp. EAN1pec, complete genome6e-55224BLASTN svgBLASTP svg
NC_009921:55080005508000553009922100Frankia sp. EAN1pec, complete genome2e-54222BLASTN svgBLASTP svg
NC_010571:2423732*2423732244807724346Opitutus terrae PB90-1, complete genome1e-52216BLASTN svgBLASTP svg
NC_009921:38549693854969389148136513Frankia sp. EAN1pec, complete genome5e-52214BLASTN svgBLASTP svg
NC_014761:41737741737743812520749Oceanithermus profundus DSM 14977 chromosome, complete genome8e-51210BLASTN svgBLASTP svg
NC_007777:49543064954306497563821333Frankia sp. CcI3, complete genome1e-49206BLASTN svgBLASTP svg
NC_015434:23754392375439239859923161Verrucosispora maris AB-18-032 chromosome, complete genome3e-47198BLASTN svgBLASTP svg
NC_014666:300571*30057132924028670Frankia sp. EuI1c chromosome, complete genome1e-46196BLASTN svgBLASTP svg
NC_007778:4814000*4814000483709923100Rhodopseudomonas palustris HaA2, complete genome8e-42180BLASTN svgBLASTP svg
NC_015259:485015*48501556418379169Polymorphum gilvum SL003B-26A1 chromosome, complete genome3e-35159BLASTN svgBLASTP svg
NC_003919:1716831*1716831175716240332Xanthomonas axonopodis pv. citri str. 306, complete genome1e-34157BLASTN svgBLASTP svg
NC_011145:2543321*2543321257209928779Anaeromyxobacter sp. K, complete genome4e-34155BLASTN svgBLASTP svg
NC_011420:2692857*2692857271509922243Rhodospirillum centenum SW, complete genome4e-34155BLASTN svgBLASTP svg
NC_013159:38584253858425388459926175Saccharomonospora viridis DSM 43017, complete genome7e-33151BLASTN svgBLASTP svg
NC_007958:4541110*4541110456409922990Rhodopseudomonas palustris BisB5, complete genome7e-33151BLASTN svgBLASTP svg
NC_005296:4985991*4985991500948223492Rhodopseudomonas palustris CGA009, complete genome3e-32149BLASTN svgBLASTP svg
NC_008278:2732890*2732890278559152702Frankia alni ACN14a, complete genome3e-32149BLASTN svgBLASTP svg
NC_011004:5283648*5283648530714923502Rhodopseudomonas palustris TIE-1, complete genome3e-32149BLASTN svgBLASTP svg
NC_003888:40312994031299405409922801Streptomyces coelicolor A3(2), complete genome1e-31147BLASTN svgBLASTP svg
NC_011891:2607812*2607812263605028239Anaeromyxobacter dehalogenans 2CP-1, complete genome3e-29139BLASTN svgBLASTP svg
NC_007760:1806136*1806136183371527580Anaeromyxobacter dehalogenans 2CP-C, complete genome3e-29139BLASTN svgBLASTP svg
NC_007644:16122216122218971628495Moorella thermoacetica ATCC 39073, complete genome1e-28137BLASTN svgBLASTP svg
NC_018750:37415813741581376849826918Streptomyces venezuelae ATCC 10712, complete genome1e-28137BLASTN svgBLASTP svg
NC_020302:2677617*2677617270009922483Corynebacterium halotolerans YIM 70093 = DSM 44683, complete1e-28137BLASTN svgBLASTP svg
NC_020453:7409402*7409402743330123900Agromonas oligotrophica S58 DNA, complete genome1e-28137BLASTN svgBLASTP svg
NC_015953:34565353456535350619749663Streptomyces sp. SirexAA-E chromosome, complete genome4e-28135BLASTN svgBLASTP svg
NC_015684:3340519*3340519336660926091Oligotropha carboxidovorans OM5 chromosome, complete genome2e-27133BLASTN svgBLASTP svg
NC_012587:2744731*2744731277030625576Rhizobium sp. NGR234, complete genome2e-27133BLASTN svgBLASTP svg
NC_011386:763111*76311178777324663Oligotropha carboxidovorans OM5, complete genome2e-27133BLASTN svgBLASTP svg
NC_019673:359540*35954038271523176Saccharothrix espanaensis DSM 44229 complete genome6e-27131BLASTN svgBLASTP svg
NC_013510:262888*26288828309920212Thermomonospora curvata DSM 43183, complete genome2e-26129BLASTN svgBLASTP svg
NC_014151:44973244973248203832307Cellulomonas flavigena DSM 20109 chromosome, complete genome2e-26129BLASTN svgBLASTP svg
NC_014935:15118351511835153500523171Nitratifractor saLSUginis DSM 16511 chromosome, complete genome1e-25127BLASTN svgBLASTP svg
NC_002678:2739829*2739829276997330145Mesorhizobium loti MAFF303099, complete genome1e-25127BLASTN svgBLASTP svg
NC_010162:10208521102085211023231523795Sorangium cellulosum 'So ce 56', complete genome4e-25125BLASTN svgBLASTP svg
NC_013714:24776382477638250276825131Bifidobacterium dentium Bd1, complete genome2e-24123BLASTN svgBLASTP svg
NC_004463:1520303*1520303154802027718Bradyrhizobium japonicum USDA 110, complete genome2e-24123BLASTN svgBLASTP svg
NC_013722:75147375147377584224370Xanthomonas albilineans, complete genome6e-24121BLASTN svgBLASTP svg
NC_012669:41182304118230414262824399Beutenbergia cavernae DSM 12333, complete genome6e-24121BLASTN svgBLASTP svg
NC_015711:3085038*3085038311227427237Myxococcus fulvus HW-1 chromosome, complete genome9e-23117BLASTN svgBLASTP svg
NC_015671:32119723211972325530043329Cellvibrio gilvus ATCC 13127 chromosome, complete genome4e-22115BLASTN svgBLASTP svg
NC_008095:6253610*6253610628320829599Myxococcus xanthus DK 1622, complete genome4e-22115BLASTN svgBLASTP svg
NC_013530:42354042354044649822959Xylanimonas cellulosilytica DSM 15894, complete genome1e-21113BLASTN svgBLASTP svg
NC_010512:1196616*1196616122450027885Burkholderia cenocepacia MC0-3 chromosome 3, complete sequence1e-21113BLASTN svgBLASTP svg
NC_008536:2961460*2961460298496123502Solibacter usitatus Ellin6076, complete genome1e-21113BLASTN svgBLASTP svg
NC_008544:615448*61544864197226525Burkholderia cenocepacia HI2424 chromosome 3, complete sequence6e-21111BLASTN svgBLASTP svg
NC_008060:1544920*1544920156855223633Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence6e-21111BLASTN svgBLASTP svg
NC_009921:52200052200056210240103Frankia sp. EAN1pec, complete genome2e-20109BLASTN svgBLASTP svg
NC_010725:39619813961981398401922039Methylobacterium populi BJ001, complete genome2e-20109BLASTN svgBLASTP svg
NC_014550:2835696*2835696285851122816Arthrobacter arilaitensis Re117, complete genome9e-20107BLASTN svgBLASTP svg
NC_009667:1076718*1076718109886222145Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequence9e-20107BLASTN svgBLASTP svg
NC_018720:17630617630623239356088Bifidobacterium asteroides PRL2011 chromosome, complete genome4e-19105BLASTN svgBLASTP svg
NC_015690:79050079050081630625807Paenibacillus mucilaginosus KNP414 chromosome, complete genome4e-19105BLASTN svgBLASTP svg
NC_015514:47793547793550079522861Cellulomonas fimi ATCC 484 chromosome, complete genome4e-19105BLASTN svgBLASTP svg
NC_008380:4532969*4532969455742124453Rhizobium leguminosarum bv. viciae 3841, complete genome4e-19105BLASTN svgBLASTP svg
NC_003911:3453764*3453764347948625723Silicibacter pomeroyi DSS-3, complete genome4e-19105BLASTN svgBLASTP svg
NC_010002:57523635752363577667524313Delftia acidovorans SPH-1, complete genome1e-18103BLASTN svgBLASTP svg
NC_015588:47572347572350009924377Isoptericola variabilis 225 chromosome, complete genome1e-18103BLASTN svgBLASTP svg
NC_020126:39797923979792400548025689Myxococcus stipitatus DSM 14675, complete genome1e-18103BLASTN svgBLASTP svg
NC_009921:1668306*1668306172598657681Frankia sp. EAN1pec, complete genome6e-18101BLASTN svgBLASTP svg
NC_012850:3867743*3867743389224624504Rhizobium leguminosarum bv. trifolii WSM1325, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_007925:4756236*4756236477957123336Rhodopseudomonas palustris BisB18, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_009921:5202607*5202607524409941493Frankia sp. EAN1pec, complete genome9e-1797.6BLASTN svgBLASTP svg
NC_009921:52756945275694530509929406Frankia sp. EAN1pec, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_008095:8198970*8198970822901030041Myxococcus xanthus DK 1622, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_006087:24392522439252246595526704Leifsonia xyli subsp. xyli str. CTCB07, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_008027:4953432*4953432497941825987Pseudomonas entomophila L48, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_009049:80184*8018410775527572Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequence1e-1593.7BLASTN svgBLASTP svg
NC_015953:3159234*3159234318318823955Streptomyces sp. SirexAA-E chromosome, complete genome5e-1591.7BLASTN svgBLASTP svg
NC_012489:1874415*1874415190141126997Gemmatimonas aurantiaca T-27, complete genome5e-1591.7BLASTN svgBLASTP svg
NC_009921:8147947*8147947818742439478Frankia sp. EAN1pec, complete genome5e-1591.7BLASTN svgBLASTP svg
NC_009921:49036884903688492656422877Frankia sp. EAN1pec, complete genome5e-1591.7BLASTN svgBLASTP svg
NC_015259:673662*67366271961445953Polymorphum gilvum SL003B-26A1 chromosome, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_009712:16678091667809169136723559Candidatus Methanoregula boonei 6A8, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_014221:2392150*2392150241624224093Truepera radiovictrix DSM 17093 chromosome, complete genome8e-1487.7BLASTN svgBLASTP svg
NC_014355:2210884*2210884223973028847Candidatus Nitrospira defluvii, complete genome8e-1487.7BLASTN svgBLASTP svg
NC_020054:31324783132478315676324286Fibrella aestuarina BUZ 2 drat genome8e-1487.7BLASTN svgBLASTP svg
NC_019940:24850002485000250482819829Thioflavicoccus mobilis 8321 chromosome, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_015673:106038*10603812809922062Corynebacterium resistens DSM 45100 chromosome, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_014219:83888*8388810707623189Bacillus selenitireducens MLS10 chromosome, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_011985:3282924*3282924330901226089Agrobacterium radiobacter K84 chromosome 1, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_009921:3551036*3551036362235971324Frankia sp. EAN1pec, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_003047:2798367*2798367282259924233Sinorhizobium meliloti 1021, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_008686:50750*507507732426575Paracoccus denitrificans PD1222 chromosome 1, complete sequence1e-1283.8BLASTN svgBLASTP svg
NC_014121:37769023776902380024423343Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete1e-1283.8BLASTN svgBLASTP svg
NC_015186:2197236*2197236229649299257Acidiphilium multivorum AIU301, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_020260:88230788230791401031704Cronobacter sakazakii Sp291, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_015740:45083754508375452814119767Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete5e-1281.8BLASTN svgBLASTP svg
NC_009952:592000*59200063739445395Dinoroseobacter shibae DFL 12, complete genome5e-1281.8BLASTN svgBLASTP svg
NC_010994:4071131*4071131409424623116Rhizobium etli CIAT 652, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_009921:465683*46568348782722145Frankia sp. EAN1pec, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_007761:3962474*3962474398568423211Rhizobium etli CFN 42, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_012590:2501593*2501593252409922507Corynebacterium aurimucosum ATCC 700975, complete genome8e-1177.8BLASTN svgBLASTP svg
NC_013715:18862151886215190668320469Rothia mucilaginosa DY-18, complete genome8e-1177.8BLASTN svgBLASTP svg
NC_015873:21974122197412221909921688Megasphaera elsdenii DSM 20460, complete genome8e-1177.8BLASTN svgBLASTP svg
NC_014039:334892*33489235832823437Propionibacterium acnes SK137 chromosome, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_008254:3246306*3246306327014823843Mesorhizobium sp. BNC1, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_007777:2186000*2186000220820922210Frankia sp. CcI3, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_006085:30856730856732922620660Propionibacterium acnes KPA171202, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_005773:866157*86615792659960443Pseudomonas syringae pv. phaseolicola 1448A, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_004578:895019*89501992169226674Pseudomonas syringae pv. tomato str. DC3000, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_009921:53315655331565535374522181Frankia sp. EAN1pec, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_009921:55319725531972555201920048Frankia sp. EAN1pec, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_009921:64836606483660651171428055Frankia sp. EAN1pec, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_014727:1292213*1292213132033528123Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,1e-0973.8BLASTN svgBLASTP svg
NC_009937:4768500*4768500479259924100Azorhizobium caulinodans ORS 571, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_008095:3719441*3719441374439224952Myxococcus xanthus DK 1622, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_008044:136844*13684416509628253Silicibacter sp. TM1040, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_008048:38964538964542759937955Sphingopyxis alaskensis RB2256, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_009077:48103794810379483961029232Mycobacterium sp. JLS, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_009720:2143124*2143124216762924506Xanthobacter autotrophicus Py2, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_010125:1651687*1651687167689225206Gluconacetobacter diazotrophicus PAl 5, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_013850:1198134*1198134121800019867Klebsiella variicola At-22 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_015953:46732467328409937368Streptomyces sp. SirexAA-E chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_019892:81240708124070814363319564Singulisphaera acidiphila DSM 18658 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_015161:2018493*2018493204698428492Deinococcus proteolyticus MRP chromosome, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_012032:3281869*3281869330162619758Chloroflexus sp. Y-400-fl, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_010572:820008200014493162932Streptomyces griseus subsp. griseus NBRC 13350, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_010175:3287500*3287500330660919110Chloroflexus aurantiacus J-10-fl, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_008054:1117703*1117703113633218630Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, complete3e-0765.9BLASTN svgBLASTP svg
NC_008529:11336651133665115246418800Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, complete3e-0765.9BLASTN svgBLASTP svg
NC_014215:1929000*1929000194714618147Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,3e-0765.9BLASTN svgBLASTP svg
NC_015730:3853065*3853065387982526761Roseobacter litoralis Och 149 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_010729:1344903*1344903136284917947Porphyromonas gingivalis ATCC 33277, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_009434:2577717*2577717259643418718Pseudomonas stutzeri A1501, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_007519:33557683355768338139525628Desulfovibrio alaskensis G20 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_007802:179780*17978020828528506Jannaschia sp. CCS1, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_008278:2772726*2772726280322330498Frankia alni ACN14a, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_008820:24220002422000244435622357Prochlorococcus marinus str. MIT 9303, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_009648:3192483*3192483321423721755Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_009921:36668983666898374071873821Frankia sp. EAN1pec, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_012673:1600242*1600242162036820127Exiguobacterium sp. AT1b, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_014314:1148000*1148000118188033881Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, complete5e-0661.9BLASTN svgBLASTP svg
NC_020126:72854527285452730937223921Myxococcus stipitatus DSM 14675, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_003063:757999*75799978308325085Agrobacterium tumefaciens str. C58 chromosome linear, complete5e-0661.9BLASTN svgBLASTP svg
NC_003305:1297785*1297785132171123927Agrobacterium tumefaciens str. C58 chromosome linear, complete5e-0661.9BLASTN svgBLASTP svg